Scyliorhinus canicula (smaller spotted catshark): 119971299
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Entry
119971299 CDS
T11175
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04115
p53 signaling pathway
scau04120
Ubiquitin mediated proteolysis
scau04137
Mitophagy - animal
scau04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119971299 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119971299 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119971299 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
119971299 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119971299 (siah1)
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119971299 (siah1)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119971299 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
119971299
NCBI-ProteinID:
XP_038662589
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Position
9:complement(48319406..48350755)
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AA seq
282 aa
AA seq
DB search
MSRQTATTLPTGTSKCTPAQRVPALAGTTASNSDLASLFECPVCFDYVLPPILQCQSGHL
VCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEEL
CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVM
MQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATP
RSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcagactgccacaacactccccacaggtacatcaaagtgcactcctgcccag
agagtcccagcattggcaggaactacagcctccaacagtgatttagcaagtctatttgag
tgtccagtgtgctttgactatgtgctaccaccaatccttcagtgccagagtggccatctt
gtctgcagcaactgccgtcctaaacttacatgctgtcccacttgccggggccctttgggt
tccattcgcaacttggctatggaaaaagtggccaactctgtactgttcccttgtaaatat
gcctcttcaggttgtgagataacactgccacatacagagaaagcagaccatgaggaactc
tgtgagttcaggccatactcatgtccttgccctggtgcctcttgtaaatggcagggttct
ctggatgctgtaatgccacacctgatgcatcaacacaagtccatcacaaccttacagggt
gaggatatagtttttctggccacagacattaatcttccaggtgcagttgattgggttatg
atgcagtcatgttttggcttccatttcatgttggtcttagaaaaacaggaaaagtatgat
ggccaccaacaattttttgccatagtacaactaattggaacacgcaaacaagctgaaaac
tttgcctatcgacttgaactcaatggccacagacggcgactgacttgggaagcaactcct
cgatcaattcatgagggtattgccacagcaattatgaatagtgactgtctggtatttgac
actagcattgcacagctttttgcagaaaatggaaacctgggaatcaatgtaacaatctca
atgtgttga
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