KEGG   Scyliorhinus canicula (smaller spotted catshark): 119971427
Entry
119971427         CDS       T11175                                 
Symbol
tradd
Name
(RefSeq) tumor necrosis factor receptor type 1-associated DEATH domain protein
  KO
K03171  tumor necrosis factor receptor type 1-associated DEATH domain protein
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010  MAPK signaling pathway
scau04210  Apoptosis
scau04217  Necroptosis
scau04622  RIG-I-like receptor signaling pathway
scau04920  Adipocytokine signaling pathway
scau05132  Salmonella infection
scau05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:scau00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    119971427 (tradd)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    119971427 (tradd)
   04217 Necroptosis
    119971427 (tradd)
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    119971427 (tradd)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    119971427 (tradd)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119971427 (tradd)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119971427 (tradd)
SSDB
Motif
Pfam: TRADD_N Death Trimer_CC CARD_2
Other DBs
NCBI-GeneID: 119971427
NCBI-ProteinID: XP_038662860
LinkDB
Position
9:74811801..74868395
AA seq 318 aa
MDSVAPAWVGSVFLFIHSDKTDLSALYQDPEIQLRIYKALKLTLADATGSAGGYEILKIY
GSVFGLQLKFMEEGKCRKFLHSYKNDKLQQALEYHFQNQFIPNTAFTTKLKAGTVTLDDI
LDNPDSCLKHIKENEPNHLRDDEVSRLEEDIRRLVLEYNSNCQNSGTLCSTNSEISPTAS
TLSPSSPGSSNLSPSSPSSIQANGSSLRSTDRFEFQGVFFDDHVLRAQDHYTFAKAVGRN
WKQVGRMLQKTCRGLRDPAIDNIAFEYEREGLYEQAYQMLIKFVQCEGKKATMSRLIRAL
EESELVGVVEQLLNTPNN
NT seq 957 nt   +upstreamnt  +downstreamnt
atggattctgtggctccagcctgggtgggcagtgtgtttctcttcattcactcagacaag
acggatctatcggccctgtaccaggaccccgaaatacagctgaggatttataaagccctg
aaactgactcttgctgatgctaccggcagtgcaggaggttatgaaatcctgaaaatttat
ggaagtgtctttggactccagctgaaatttatggaagaaggaaaatgcaggaagtttctt
cacagttacaaaaatgacaaactccagcaggctttagagtatcattttcaaaaccaattt
atacccaacactgctttcacaacgaagctgaaggctggtacagtgacattggatgatatt
ctggataatccagacagctgcctaaagcacatcaaagagaatgagcctaaccatctccgc
gatgatgaagtcagcagattggaagaagacattaggcggctggtccttgaatacaattca
aactgccagaactctggaacactatgcagcactaattcagaaatatcaccaacagcctca
accctatcgccatcctcaccaggttcatcaaatctgtctccatcttctccgtcttcaata
caagcaaatggaagctcacttcgatcaactgaccgttttgaatttcagggtgtttttttt
gatgaccatgttttgagggcacaggatcactacacctttgccaaagcagtgggcaggaac
tggaagcaggtcggccgcatgttacagaagacctgccggggtcttcgggatcccgccatc
gacaatatagcctttgagtacgagcgggaaggattgtatgagcaggcataccaaatgttg
atcaagtttgttcagtgcgaagggaagaaagctacaatgagtcggctgattagagcattg
gaggaaagtgaactggttggggttgttgagcagttgctgaacaccccgaataattaa

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