Scyliorhinus canicula (smaller spotted catshark): 119971443
Help
Entry
119971443 CDS
T11175
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119971443 (rfwd3)
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119971443 (rfwd3)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119971443 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_THOC3
Beta-prop_WDR5
zf-C3HC4
WD40_CDC20-Fz
zf-RING_UBOX
WD40
Rtf2
zf-C3HC4_2
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_1st
WDR55
zf-rbx1
zf-RING_5
Beta-prop_WDR36-Utp21_1st
WD40_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
zf-C3HC4_4
WD40_Prp19
Beta-prop_WDR75_1st
CFAP43_N
zf-RING_4
Myo5a
zf-RING_Vps41
Beta-prop_RIG_2nd
zf-UDP
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SPT8
zf-Nse
zf-RING_11
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
119971443
NCBI-ProteinID:
XP_038662905
LinkDB
All DBs
Position
9:complement(77392893..77439860)
Genome browser
AA seq
738 aa
AA seq
DB search
MAEEVIDVDMEPEEQAVAPQLSLQEPASRPTGSGLSTASIGEEAGAPSGTEAPSTAHSGG
LEAALLTEELQRLQGALRTVAQHFSLGQRPGHQRRQMRRTGRRQLGASASQRSASSRSGA
LDNYFRVNRQQRTQSARLVAEYGEDEMSSEDSSTDLSTDISESEESGSTTEIEDEYEGDE
SASAPSAPTSAPMLVNPTPVQSAEAGDSQSTRQEQESLTSHSEDTLNVKEDAATTKATDT
AASDEEAYSCPICFEPCTNGGHHLATLQCGHLFGSTCISQWLKGGGGKCPQCNKKAKRSD
VVLVYAPTVKVVDTSEQERLKRDLEKEQVMRRKAELESAQCRLQLQFLTDECSKLRKQLQ
ELRCLIAKHNPSASQGPSRSYNPLTGHTSSSQSQCKYQFEKGIMVSQSGNCRVMAYSSLM
SCLVVSQPSPQTTLLPGCGVKKISGMNFRSTQYVPIHSKQIRGLAFSDHPDSVLLSASLD
NTIKLTSLIANTVVQTYNTGRPVWSCCWCSDDTNYIYAGLINGSILIYDMRDTTTHVQEL
PSQGSRCPVTSLSYLPRMASAAFPCGGLVAGTLEGGCFWEQKSTNTYKAHLLPLEVGSCT
DIQIEPTMRHCLVTYRPTGKTHSSLRCVMMELSSSPSPDSLENLVCTCYPVQTFQAGPTC
KLLTKNAIFASPENDGNVLVCAGDEATNSAMVWNAGSGSLIQKLQADQPVLDICPFEVNH
TNFLGTLTEKMVKIYKWA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaagtaattgacgtggatatggagccagaggagcaagctgtggcgccacag
ttgagtctgcaagaaccagcgtcgaggccaacaggatctggattgagtactgcatccatt
ggcgaggaggcaggtgcaccgtctggaaccgaagccccttcaactgctcacagtggtggt
ctggaagcagcattgctaactgaggaacttcaaagactgcaaggagcgctgagaactgtg
gcacagcacttttctcttgggcagagacctgggcaccagcgcaggcaaatgaggcggact
ggccgccgtcagctgggagcaagcgcttcccagagatctgcatcatccaggtctggagct
ttggacaactacttccgggttaacagacagcaacgcacacaatcagccaggttagtagcc
gaatatggagaagatgagatgagcagtgaagattccagtaccgatctgagcaccgatatc
agtgagtctgaggagagtggcagcaccacagagatagaggatgagtacgagggcgatgaa
tctgcatcagctccgtcagctcccactagtgcccccatgctggtcaaccccacaccagtt
cagagtgccgaggctggagattcacagtctacacggcaagagcaggaaagcttgacttcg
cactctgaagacactctaaatgtgaaagaagatgcagcgaccaccaaagccactgacact
gcagcctctgatgaagaagcgtattcgtgccccatctgctttgagccgtgcactaatgga
gggcaccatcttgctactctgcagtgcggccatctctttggctctacctgcatctcccaa
tggctgaaggggggaggaggaaaatgtccacagtgtaacaagaaagctaagcggtcagat
gtggtgttggtgtatgccccaacagtgaaagttgtggataccagtgagcaggagcgattg
aagagagatctggagaaggagcaggtgatgcgtcggaaagcggagctcgaatctgcacag
tgtcgtctccaactgcagttcttgacagatgagtgcagcaagttacgtaaacagctgcag
gaactgagatgtctgattgccaagcacaatccaagtgcttctcagggtccctctagatcc
tataatcccctaactggtcacaccagttctagtcaaagccagtgcaagtaccagtttgag
aaaggaatcatggtttcgcagagtgggaactgtcgggtcatggcatattcttctttgatg
agctgtctcgttgtgtcccaaccttctcctcaaacaactctcctacctgggtgtggcgtg
aagaagataagtgggatgaacttccgcagcacccagtatgttccaatccattccaaacaa
atcagaggtctggcattcagtgaccatcccgacagcgtactcctttctgcatccctggac
aacactatcaaattaaccagcctgattgccaacactgtggttcagacatacaacactggt
cgccctgtctggagctgctgctggtgctccgatgacacaaactacatctatgctgggctg
ataaatggttccatcttgatttacgacatgagggacaccaccacacacgtccaggagctg
ccatcacagggttccaggtgtcctgtgacttcattgtcttatctcccacgtatggcttct
gcagcatttccatgtggtggtctggtggccggtaccctggagggagggtgcttctgggag
cagaaatccacaaacacatacaaggcgcatttgctgcccctcgaagttggaagctgcaca
gatatacagattgaacccacgatgcgacactgtcttgttacttacaggccaacaggtaaa
actcatagttctttacggtgtgtgatgatggaactgtccagcagtccttccccagattcg
ttggagaacctagtctgcacatgttacccagtgcaaacgtttcaagcgggcccgacgtgt
aaactactcaccaaaaatgccatttttgcaagtccagagaatgacggcaatgttttggtg
tgtgctggggatgaggcaaccaacagtgctatggtgtggaatgcagggagtggctccctc
atccagaagctccaagcagaccagcctgtcctggatatctgcccctttgaggtgaatcac
actaattttttgggaactctgacagaaaaaatggtcaagatctacaagtgggcctga
DBGET
integrated database retrieval system
