Scyliorhinus canicula (smaller spotted catshark): 119971630
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Entry
119971630 CDS
T11175
Symbol
atg13
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04136
Autophagy - other
scau04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119971630 (atg13)
04136 Autophagy - other
119971630 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119971630 (atg13)
03029 Mitochondrial biogenesis [BR:
scau03029
]
119971630 (atg13)
Membrane trafficking [BR:
scau04131
]
Autophagy
Autophagosome formation proteins
ULK complex
119971630 (atg13)
Atg1 complex
119971630 (atg13)
Mitochondrial biogenesis [BR:
scau03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119971630 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
119971630
NCBI-ProteinID:
XP_038663379
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All DBs
Position
9:116866485..117074399
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AA seq
554 aa
AA seq
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MDGELSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLNGLGEGFQTVRVGMVGTPV
GTITLSCAYRTNLAFMSGRQLERTPPIMGIIIDHFVDRPYSGSSPLHPCNYRWDSNNSHK
GTFPSVEDSQEVCTTSFSTSPPSQCVFTVSKHIFKTSRPXVMDTLKVPLLGLTFTHQLYS
SHLSYQPFATLGGGSADLACCSAALTAGVNTAHPHQMIVPSKEGGIPVLPLHPAPGTQAD
HDRVPLCNLTDMNQHVAATPSSSGETELLSKSSEGKSGTPQDTLETTFIRKVGAFVNKPT
NQVIAANMDLPFAVFASKIVESEDTDVMVNPPDSPTLESPLHASLHSDQSSGSSGLTQDE
FVMVELKPAFSKDDFLPMDLGTFYREFQNPPQLSSLSIDISAQSMAEDLDSLPEKLAIYE
KNMEEFDAFVDTLQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgaactgagccctcaagataagaaggacctggataagttcattaaattcttt
gccctgaagaccgtccaggtaattgtgcaagcacggctcggggaaaagatatgtacccgt
tcatcctcttctccgacaggctcagactggtttaaccttgcaataaaggacataccagaa
gtcacccatgaggctaagaaggcactggcagggcaacttccaggaattggacggtcaatg
tgtgtggaaatttctctgaagacatctgagggagattctatggaactggaaacatggtgt
ttggaaatgaatgaaaaatgtgataaagaaattaaggtttcctacactgtctacaacaga
ctgtctttgctactgaagtcgcttcttgcaatcacaagggtgacacccgcatataaacta
tcccgaaagcagggacatgattatgtaatcctatacaggatatattttggagaagtgcag
ctgaatggccttggcgaaggttttcagacggtacgggttggaatggttggaacccctgtc
ggcactatcacgctgtcatgtgcataccgaactaacctggctttcatgtctggcaggcaa
ctggagcggaccccgccaatcatggggattatcatagaccactttgtagatcgtccctat
agtggatcttcaccactacacccatgtaactacaggtgggacagcaacaatagtcataag
ggtacctttccttctgtggaagattcccaggaagtctgcaccacttctttctctacttct
cctccctcgcagtgtgtgtttactgttagtaagcacattttcaagacttccaggccanat
gtgatggacacactgaaggtccccctgctaggcttgacctttacgcatcaactctacagc
tcacatctttcctatcagccctttgctacacttggtggtggttcagctgaccttgcctgt
tgctcagcagctttaactgctggtgtaaatactgctcatcctcatcagatgatagtccct
agtaaagaaggaggtatacctgttttgcctctacatcctgctcctggtacccaggctgac
cacgatagggtgcctctctgtaatttgacagatatgaatcaacatgtggcagcaacacct
tctagcagtggtgaaacagaattgttatcaaagagcagtgaagggaagagcggaacgcca
caagatacactggagaccacctttatcaggaaagtgggagcatttgttaacaaaccaacc
aatcaggtcattgctgccaatatggatttaccatttgctgtttttgcatcaaaaattgtt
gaatctgaggacactgatgtcatggtcaatccacctgattcccctaccctagaatcacct
ctgcatgcgagccttcattcagaccagtccagtgggagcagcggcctcacacaggatgaa
tttgttatggtggaactaaagccagccttttccaaggatgattttctacctatggacctg
ggcaccttttatagggagtttcagaatcctcctcaattgagcagcctctccatagacatc
agtgctcagtcaatggcggaggatctggattccttgcctgagaagctagcaatctatgaa
aagaatatggaagaatttgatgcctttgtagatactctgcagtaa
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