Scyliorhinus canicula (smaller spotted catshark): 119971667
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Entry
119971667 CDS
T11175
Symbol
cars1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119971667 (cars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scau01007
]
119971667 (cars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scau03016
]
119971667 (cars1)
Enzymes [BR:
scau01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
119971667 (cars1)
Amino acid related enzymes [BR:
scau01007
]
Aminoacyl-tRNA synthetase
Class I (G)
119971667 (cars1)
Transfer RNA biogenesis [BR:
scau03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119971667 (cars1)
Prokaryotic type
119971667 (cars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
GIPC1_GH1
Baculo_Ac102
CEP15-like
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
119971667
NCBI-ProteinID:
XP_038663450
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All DBs
Position
9:127507716..127638479
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AA seq
827 aa
AA seq
DB search
MEAGEAYHYSAFLGVSTDESGMKALNDHLAARSYIVGFTFSQADVEIFRSLPKPPLDQYF
HVKRWYRHIAAIWDCSQDDAKTCKLHTSKVKRTQPPWSPPPELKQPELRLYNSLTRSKEI
FRPQNGKRVLWYCCGPTVYDASHMGHARSYISFDILRRILMNYFKYDIFYCMNITDVDDK
IIKRARQNHLFEQYKEKNLGAMQLLEDIRTAFKYFSVKLAETTDPDKKQMLQRINQAVES
SLKSLEEAMQQAFSSEEIGNRAKVLLNEAKDMLSDWLDVQFGSQVADNSIFSTLPKYWEG
EYHKDMDALNVLPADVLTRVSEYVPEIVQFVKKVVDNGYGYVSNGSVYFDTVKFDSSEKH
SYAKLVPEAVGDQKALHEGEGDLSISADRLSEKHSPNDFALWKASKPGEPSWDSPWGKGR
PGWHIECSAMAASILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHLT
IAGCKMSKSLKNFITIKDALNANTGRQLRLAFLTHSWKDTLDYSSNTMDSAVQYEKFLNE
FFLNVKDILRTPTDITGQFERWQEQELTLNNRFYEKKTAVHRALCDNIDTRTVMEELRSL
VSQCNTYIAAKKSNKQLPNRILLKTIAVYLTEMLKIFGAIEGEEPIGFPVGGGSQNLNVE
ATVMPYLKVLSDFRENVRQIAREKKVSEVLQLCDGLRDDVLPELGVRFEDHEGLPTVVKL
VDRETLLREREEKKKIEEEKRRKKEEAAQKKREQEAAKLAKMKIPPSELFRLEKDKYSKF
DENGIPTHDMEGKELSKGQTKKLRKLYEMQEERYNEYVRMLQNSSTK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaggcgaggcttaccactacagtgcgttccttggtgtatccactgatgagagt
ggaatgaaggctctaaatgatcatctcgctgcacggagttacatcgttggcttcacattt
tcacaagctgacgtggaaatattcagatcgcttccaaaaccccctcttgatcagtacttc
cacgtgaagcggtggtacaggcacattgcagcaatttgggattgcagccaagatgatgcc
aagacatgtaaactccacacatccaaagtgaagagaacccagccaccatggtccccacca
ccagaattgaaacagcctgagctccggctatacaacagtttgactcgtagcaaggagatc
tttcgtcctcagaatgggaagcgtgtgttgtggtattgctgtgggcccactgtttatgat
gcttcacacatgggacatgccaggtcctacatctcctttgacatcctgcgacggattcta
atgaactacttcaaatatgacatattctactgtatgaacatcacagatgtggatgacaag
attatcaagcgagcccgacagaatcacctatttgaacagtacaaagagaaaaatctgggt
gctatgcaacttctagaagacatcaggactgctttcaagtatttttctgtgaaacttgct
gaaaccactgacccagacaagaagcagatgctgcagaggattaatcaagcagttgagtca
tccctcaaatccctggaggaggcaatgcagcaggcgttttccagcgaagagataggcaac
cgagctaaggtgctgctgaatgaagcaaaggacatgttgtctgattggctggatgtacag
tttggcagtcaagtggctgacaattccatcttttctactcttcccaagtactgggagggg
gaatatcacaaagacatggatgcactcaacgttttgcctgcagatgttttaactcgagtg
agtgaatacgttcctgagattgtacagtttgttaagaaggtggttgacaacggttatggt
tatgtctccaatggttctgtatacttcgacacagtaaagtttgacagcagtgaaaagcac
tcgtatgccaaactggtgcctgaggctgttggagaccagaaagcacttcatgaaggagaa
ggtgaccttagtatttcagctgatcgactaagtgagaagcactctcccaatgactttgca
ctgtggaaagcctccaagcctggagaaccatcttgggattcgccctggggaaagggccgt
cctggttggcacattgaatgctcagcaatggctgctagcattctaggagaatccatggac
atccatggtggaggatttgacctgcgcttccctcatcacgataatgaattggcgcagtct
gaggcttattttgaaaatgatcactgggttcgatacttcctccacactgggcacctaacc
atagcaggctgcaagatgtcaaaatcgttaaaaaatttcataactatcaaggatgctctg
aatgcaaatacaggtcggcaactgcgtcttgcatttctcacgcactcatggaaggataca
ctggattattccagcaataccatggattcggccgttcagtatgaaaaattcttaaatgag
ttcttcctgaacgtgaaggatattttgcggaccccaacagatatcacaggacagtttgag
aggtggcaggagcaggagctgacacttaataaccgtttttatgagaagaaaactgcggtg
catagggcactgtgcgataacatcgacacccgtacagtaatggaggagctgcggtccctt
gtgagccagtgtaacacatatattgctgccaagaaaagcaacaagcagctaccaaatcgc
atactgttgaagactattgcagtgtatctcactgagatgctgaagatttttggtgcaata
gaaggtgaagaaccaattggatttcctgttggaggaggcagccagaatttaaatgtggaa
gccacagtgatgccatacttgaaggtgttgtcagatttccgtgagaacgtgcggcaaatt
gcccgtgagaagaaagtgagtgaggttctacagctgtgtgacggcctgcgagatgatgtt
cttccagagcttggagtccgctttgaggaccatgaagggctacctactgtggtgaaactt
gtggacagagagacattgttgagggagcgagaagagaagaaaaagattgaagaagagaaa
aggaggaaaaaggaagaagcagcccaaaaaaagcgagagcaggaggcagcaaaactggcc
aagatgaaaatccctccgagcgagttgttcagattagagaaggacaagtattctaaattt
gatgaaaatgggattccaactcatgatatggagggcaaggaactgagcaaggggcagacc
aagaaacttagaaaactttatgaaatgcaggaggagcggtataatgagtatgtgcggatg
ctgcagaatagcagcaccaagtaa
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