Scyliorhinus canicula (smaller spotted catshark): 119971702
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Entry
119971702 CDS
T11175
Name
(RefSeq) fascin-like
KO
K23551
fascin 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119971702
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119971702
Membrane trafficking [BR:
scau04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119971702
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119971702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fascin
FRG1
FGF
DUF569
Motif
Other DBs
NCBI-GeneID:
119971702
NCBI-ProteinID:
XP_038663538
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All DBs
Position
9:131863066..131931705
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AA seq
487 aa
AA seq
DB search
MVYRVLPVGLINSAQKYLTAENFNFRVNATSTILKIKQIWTIEFLKENSPMVHIRSSLRR
YLAGDNNGKITCDREVPNPYNKFVMITHLDGKVSFQSEETKRYLGGAEDNITCFAQAISE
SEKWVLHLAIHPNISMFNQGKKKYLRYDANENAVQCDSELPWGRECVMALMFNFKEKKYS
LRTSSGDLIAWNGKLEPCQSSRTLYIPEIRCGMICLKDNEGRFLTGRDSYIRTIKTDSPS
LEELFSPDPSPGQVTIRSILNSKYVSLKPGADVCVHQSQVTDAEIFQIIMNNTTRKACFR
GISKDYLAVGPQNIIVASPILTDECWFNIVYNGPRVVIKTGDGKLLTSKSTGQLVVGYYT
ADNSQEFILKLTNRSLLILQSDFGFVAFGSGTQRLDGNRPMYEVSRMTSDEEGYYQFKLV
STDKYWEMDKDGFMSGTGDQPINFIIQLVGSNVLILKAPNGKYMITQQSGDFKATGEDAK
TATMFLY
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggtttacagggtgcttccagttggtctgatcaactcagcccaaaaatacttgacagca
gagaacttcaatttcagagtgaatgctaccagtaccatcttgaagattaaacagatctgg
accatcgagtttttgaaggagaattcccccatggtccacatcaggagctctctgaggaga
tacttagctggagataataatgggaaaatcacctgcgatcgggaggttcccaatccttat
aataagtttgtaatgatcactcatctggacggcaaggtctccttccagtctgaagaaaca
aaacggtacttgggaggagcagaagataatatcacttgctttgctcaggcaatctcagaa
agcgagaaatgggtactgcatttagccatccatcccaatatcagcatgttcaaccaaggc
aagaagaaatacctgcggtatgatgccaatgagaacgccgtacaatgtgacagtgagttg
ccctggggccgagagtgtgttatggcgctcatgtttaacttcaaagagaagaaatatagc
ctaaggacaagtagtggagatcttattgcctggaatgggaaacttgagccctgtcagtca
tcaaggaccttgtacatcccagagataaggtgtggaatgatttgtttaaaggacaatgaa
ggaagatttctaactggaagagacagctatattagaaccattaaaactgacagccccagc
ttggaggaacttttctctcctgacccaagccctgggcaagtcaccatcagatcaatactc
aacagcaaatatgtcagtcttaaaccaggtgcagatgtctgtgtacatcagtcacaagtg
acagatgctgagatctttcagattatcatgaataacaccactcggaaagcttgcttccgt
ggtatttcaaaggactaccttgcagtgggccctcaaaatataattgtggcgagcccaatt
ctgactgatgaatgttggtttaatattgtgtacaatgggcctagagtggttataaaaaca
ggagatggaaaactcctcacctcaaagtcgactggtcagctcgtggtgggatactataca
gctgataattctcaagaattcattctaaaactcaccaatcggtccctcctaatactgcaa
agtgattttggctttgttgcatttggttctggaacacaaagattagatggcaatagaccc
atgtatgaagtaagtaggatgacttcagatgaagaaggctactaccagttcaaactcgtg
tccacagacaagtactgggagatggacaaagacggcttcatgagcggtaccggagaccag
ccaatcaacttcattatccagctggttggttccaatgttcttatcctcaaggcaccaaat
ggaaaatacatgatcacacaacaaagcggagacttcaaagcaacaggggaagatgccaag
actgccacaatgtttctttattga
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