Scyliorhinus canicula (smaller spotted catshark): 119971741
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Entry
119971741 CDS
T11175
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119971741 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119971741 (lsp1a)
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
119971741 (lsp1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
119971741
NCBI-ProteinID:
XP_038663646
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Position
9:complement(139860588..140312480)
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AA seq
611 aa
AA seq
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MDDLEYRRELRRQKREELWRQAERLTAQRSMEDEEEIARERRRRAREEKRYDQDDSGSFT
SSTSSTPVFESLTATEENQYDFNCKSANSTLDEDEGFSDWTQRREERRQKRREELGQMEE
DHVDESQTGCTYAQRDRKGQEDQEGLSVGKLKMWQIEQEERRMLQREQEQEEAKRQQRAR
ERKQREEMEKSQKDLDERERLKHLRKESEHQDQEKTENERRKLVVEKRPKDDEIKLSHMT
EAWTKHSTYEEENNDSTLDKMAPYHACRTTKTILSEFPEADEEGELTRLEAEQKLEQIRR
SLDEKENQEYERLRQKGHDAELELEELKKRREERRRLREEEEVRRQQQEQELQAREEEEK
RRMREEREKRRMAAAEKRQKVLSISGSEMEDPFIPLSPKSPTFKKEYDEGMTPETTCLIS
ERTESLNRSLKKSNSVKKSQPITNISKIDDRLEQYTSAIENTTKSLRHASLDMPNLAEDV
ATKKSLWEAGDVAGNPVTKGSSFKETDGLKVGVFDLINQWVSRNPEPSAKASPSKPTEIM
AGDVRSKKNIWENKTDSSTKSHAAKNLSSGARYKFVVTGHGKYEKIDVADDEHDTSANNQ
STEVEHYNKEY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctggaataccgacgtgaactgcggagacagaaacgtgaagagctttggcgt
caagcagagaggctgactgcacagaggagcatggaagatgaggaggaaatagcccgcgag
cgacgccgtcgagcacgtgaggagaaacgctacgatcaggatgacagtggctccttcacg
agcagcacatcatccacaccagtatttgaaagcctcacggcaaccgaggaaaaccagtac
gacttcaactgcaagtcagccaattctaccctagatgaggacgagggcttcagtgattgg
actcagaggcgagaagagcgccggcagaaacggagggaggagctgggacagatggaagaa
gaccatgttgatgaatcacaaacaggttgcacatacgctcagcgggacagaaaggggcaa
gaggatcaggaggggctcagtgttggcaaactgaaaatgtggcagattgagcaagaggaa
agaaggatgctccaaagagagcaagagcaggaggaggcaaaacggcagcagcgagctcgt
gaaaggaagcaaagggaggagatggaaaaaagtcagaaagacctcgatgaaagagaaaga
ttaaagcatctgagaaaagagagtgagcaccaggaccaggaaaaaaccgaaaatgagagg
cgaaaattggtggtagagaagagaccaaaagatgatgagattaagctgtcccatatgact
gaggcatggaccaagcacagcacttacgaggaagaaaataatgattcgacactcgacaaa
atggcaccataccatgcctgcaggacaaccaagacaattctgagcgagttccctgaagca
gatgaggagggcgaattgactcgcctggaagctgaacagaagctggagcagatccgccgg
agtctcgacgagaaggaaaaccaggagtacgagcgcctgcggcagaagggtcatgatgcc
gagctggagctggaagaattgaagaagaggagagaggagcggcgtaggctgagggaggag
gaggaggtccggcggcagcaacaggagcaggagctacaagccagagaggaggaggagaaa
aggagaatgagagaagagcgagaaaaacgaaggatggcagcagcagagaaacggcagaag
gttcttagtatttcaggtagtgaaatggaggaccctttcattcccctcagccccaagagc
ccaacatttaagaaagagtatgatgaagggatgacgccagaaacaacctgcttgatcagt
gaaaggacagaatcgttgaaccgttcactgaagaagagtaacagtgttaagaagagtcag
cccataactaacatatcaaagattgatgatcgattggaacagtataccagtgccattgag
aacactacaaagtcactcagacatgcatcattggacatgccaaacttagcagaagatgtt
gccactaagaagagtttatgggaggcaggtgatgtcgcaggtaacccagttaccaaaggg
tcatcatttaaggagactgatggactgaaagtgggtgtttttgatcttatcaatcagtgg
gtgagcaggaacccagaacccagtgccaaggccagcccctccaaaccaacagaaattatg
gcaggagatgtgaggagcaagaagaatatttgggaaaacaaaactgattcttccaccaaa
tcacatgctgcaaagaatctttcctctggtgcaagatacaagtttgtggtaactggccat
ggcaagtacgaaaagattgacgttgctgatgatgagcacgataccagtgcaaataatcaa
tcaactgaagttgaacattataataaagaatattga
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