Scyliorhinus canicula (smaller spotted catshark): 119971863
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Entry
119971863 CDS
T11175
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119971863 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119971863 (copb1)
Membrane trafficking [BR:
scau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
119971863 (copb1)
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119971863 (copb1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119971863
NCBI-ProteinID:
XP_038664030
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Position
9:164772225..164828649
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AA seq
952 aa
AA seq
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MTAAENVCYTLINVSLDSEPPNEISLKIDLEKGDVKTKTDALKKVIIMILNGEKLPGLLM
TIIRFVLPQQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEPELLEPLMPAIRGCLEHRHSYVRRNAVLAIYTIYRNFENLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPT
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELREHPTHERVLQDLVMDVLRVLTTPDLEVRKKTLHLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAGNVIPVLMEFLSDSNEAAAADV
LEFVREAVQSFDSLRPVIIEKMLEVFHAIKSVKIYRGALWILGEYCSSKDDIQSVMTEVR
RSLGEIPIVESEIRKETGELKIDDDVQVIPTQKLVTEMGTYATQSALSTRPSKKEEDRPP
LRRFLLDGDFFVAGALATTLTKIALRYVSLVQEKKKQNTFAAEAMLIMATILHLGKSSLP
KKSITDDDVDRISLCLKVLSECSPLMSNIFNKECRKSLSQMLSAKLEEEKLSQKKQSEKR
NVVVQADDPISFMQLMAKNEMTSKEDQFQLSLLAAMGNTQRKEASDPLTSKLSKVTQLTG
FSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPHD
FANIKANVKVASTENGIIFGNIVYDISGAASDRNCVVLSDIHIDIMDYIQPALCTDAEFR
QMWAEFEWENKVTVNTNIIDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSIF
GEDALANVSIEKPVHLGPDAPVTGHIRIRAKSQGMALSLGDKINLSQKKVKA
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgcagaaaatgtatgctatacgctcataaatgtgtccttggactctgaacca
ccaaatgaaattagtctgaaaattgacttggaaaagggagatgtgaagactaagactgat
gcattgaagaaagtgatcatcatgattctgaatggagagaagctcccagggctcctgatg
acgatcattcgttttgtgttgccacagcaggatcacacaatcaaaaaactgcttcttgtg
ttttgggagattgtccctaaaactacccctgacggcaagttgctgcaggagatgattctc
gtgtgcgatgcctacagaaaggacctgcagcacccaaatgagtttattcgagggtccact
ctgcgttttttgtgcaagctgaaggagccagaacttttagagccactgatgccagccata
cgtgggtgcctggaacaccgacacagctatgtccgcagaaatgctgttctggccatctac
accatttacaggaactttgagaaccttattcctgatgctcctgagttgatccatgatttc
ttggtgaatgaaaaagatgcaagttgtaaacggaatgctttcatgatgcttattcacgca
gatcaggaccgagctctggattatctgagtacatgtattgatcaagttcatacttttgga
gacattctgcagctggtcatagttgagctgatttataaggtttgccacgccaatccaaca
gaaagagccagatttatccgttgcatctacaaccttctccagtcttcaagccctgcagta
aaatatgaagctgctggcactttagttacactctcaagtgctccaacagccatcaaggct
gctgcgcagtgctacatagatttgataattaaggagagtgataacaatgtgaagctaatt
gttttggatcgtcttattgagctgagggagcatccgacacacgagagagtgctacaggat
ttggtaatggacgtcctgcgagttttgaccacaccagatttggaggtacgcaagaagaca
ttgcatttggcgttggatcttgtctcttctcgcaatgttgaagagcttgtcatagttctc
aaaaaggaagtaattaaaacaaacaatgtatcagaacatgaagacacagacaaataccga
cagcttctggtcagaacattacattcttgcagtgtccgttttccagacatggctggaaat
gttatcccagtgctgatggaattcctcagtgacagcaatgaggcagctgctgctgacgta
ttggagtttgtgcgtgaagctgttcagagttttgatagccttcggccagtcattattgag
aagatgttggaggtgttccatgccatcaaatctgtcaagatataccggggggctctttgg
attttgggagagtactgtagctccaaggatgacattcagagtgtaatgactgaggttcgc
cgatccttgggcgagattccgatagttgagtctgagataaggaaagaaactggtgagttg
aagattgatgatgatgttcaggtgattccaacacaaaagctggtgactgagatggggaca
tatgcaacccaaagcgccctgagcacaagaccttccaaaaaggaagaagatagaccacct
ctgcgcagattcctattggatggggatttctttgtggctggtgcccttgcaactacactg
actaaaatagctctgcgttatgtgtcactggtacaagagaagaagaaacagaatactttt
gctgcagaggctatgctgatcatggccaccattttacatcttggtaaatcatcactccca
aagaaatcaatcacagatgatgatgtggaccgtatctcgctatgccttaaagtcctttca
gagtgttccccactgatgagcaacatttttaacaaagaatgcaggaaatctctctctcaa
atgctatcagccaaactggaagaggaaaagctttctcagaagaaacagtccgaaaagagg
aatgtagtggtacaggcagacgatcccatttccttcatgcagttgatggcgaagaatgag
atgacctctaaggaggaccagtttcagctcagcttattggctgcaatgggtaacacacaa
cgaaaggaagcttctgatcccttgacatccaagctcagcaaggttacgcagctaactggt
ttctctgatccagtatatgcagaagcctatgtacatgttaatcaatatgatattgtactt
gatgtactagtggtcaatcaaaccagcgacacacttcagaactgcactctggaattagcc
acattgggtgatcttaaactggttgagaaaccatcacctctaactctagcacctcatgat
tttgctaacattaaggcgaatgtgaaagtagcttcaacagaaaatggtatcatttttggt
aatatagtgtatgatatatctggggctgccagtgatagaaactgcgtggtgctgagtgat
attcacattgatatcatggactatattcagcctgccttgtgcaccgatgcagagtttcgt
cagatgtgggcagaatttgaatgggagaacaaggttacagtaaacacaaacatcattgac
ctaaatgaatacttgcagcacatccttaaatctaccaacatgaagtgtttgaccccagag
aaggctctttctggttattgtggttttatggctgccaatctctatgctcgttccatattt
ggagaagatgcacttgcaaatgtcagcatagaaaaaccagttcaccttgggcctgatgct
cctgtgactggtcacatacgcattcgggccaagagtcagggaatggctctcagtttgggt
gacaagatcaacctgtcccagaagaaagtgaaagcatag
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