Scyliorhinus canicula (smaller spotted catshark): 119972284
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Entry
119972284 CDS
T11175
Name
(RefSeq) protein argonaute-2 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119972284
03036 Chromosome and associated proteins [BR:
scau03036
]
119972284
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119972284
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119972284
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
119972284
microRNA pathway
RISC loading complex
119972284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoMid
PAZ
ArgoL1
ArgoL2
DUF3284
Motif
Other DBs
NCBI-GeneID:
119972284
NCBI-ProteinID:
XP_038664657
LinkDB
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Position
10:complement(25675189..25811686)
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AA seq
867 aa
AA seq
DB search
MFSTTEPVDTIQGELQDVASPTPPVQTLSTFKPPVRPDFGTMGRPIKLQANFFEVDIPKI
EIYHYDIDIKPDKCPRRVNREIVEHMVQHFKNQIFGDRKPVFDGRKNLYTAMPLPIGRDR
VELEVTLPGEGKDRIFKVVIKWVACVSLQALHDALSGRLPAIPFESIQALDVVMRHLPSM
RYTPVGRSFFTPSEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIE
FMCEVLDFKNIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYRVCNVTRRPASHQ
TFPLQQENGQTVECTVAQYFKDKHKLNLRYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRC
IKKLTDNQTSTMIRATARSAPDRQDEISKLMKSASFNADPYVREFGIGVRDDMTDVPGRV
LQAPSLLYGGRNKTIATPIQGVWDMRGKQFHTGIEVKVWAIACFAPQRQCREDTLKAFTD
QLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLVVVVLPGKTPVYAEV
KRVGDTLLGMATQCVQVKNVLKTSPQTLSNLCLKINVKLGGVNNILVPQGRPAVFQQPVI
FLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQQHRQEIIQDLAFMVRELLIQ
FYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHH
TRLFCTDKNERVGKSGNIPAGTTVDTKITHPSEFDFYLCSHAGIQGTSRPSHYHVLWDDN
RFNADELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHTSG
QSNGRDQQALAKAVQVHQDTLRTMYFA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgttttctactaccgagcccgtagatacgatccaaggtgagctccaagatgtggcttcg
ccaacgccgccagtgcaaacgctgtcgactttcaagccacctgtgagacctgattttgga
acaatgggtcgaccaatcaagttacaggccaacttctttgaagtggacattccaaaaatt
gaaatctaccattatgatatagacataaaaccagataaatgcccaagaagagtaaacagg
gaaatcgttgaacacatggttcagcattttaaaaatcagatctttggtgatcggaagcct
gtgtttgatggaaggaagaacctttatacagcaatgcctcttcctatagggcgagatagg
gtggagctggaagtaactctaccaggggaaggaaaggacagaatatttaaggtggtgata
aagtgggtggcatgtgtcagtctccaagccttgcatgatgcactttcgggtcgactccca
gctattccttttgaatctattcaagcactagatgtagtgatgcgacatctaccctccatg
aggtacactccagtaggccgttcattctttacaccgtctgagggttgctctaatcccttg
ggagggggcagggaagtatggtttggatttcaccagtctgtcagaccttcattatggaaa
atgatgctcaatattgatgtatctgcgacagcgttttataaagcccagccagtgattgaa
ttcatgtgtgaagttttggattttaaaaatattgaagaacagcaaaaaccattaactgac
tcccagagagtaaagttcaccaaggagatcaaaggtctcaaggtggagataactcattgt
ggacaaatgaagagaaaatatagagtgtgcaatgttaccagaagacctgcaagccatcaa
acattcccacttcagcaagagaatggacagactgttgaatgcactgtggcacaatatttc
aaggataagcacaaactaaatcttcgctatcctcatttaccgtgtctacaagttggccag
gagcaaaaacacacgtatcttcctcttgaggtgtgtaacattgtagctgggcagagatgt
ataaaaaagctgacagacaatcaaacctcaacaatgattagagccactgccaggtctgca
ccagacagacaagatgaaatcagtaaactgatgaaaagtgcgagttttaatgctgaccca
tatgttcgggaatttggaataggagtgagagatgacatgacggatgtaccaggtcgtgtt
cttcaggcaccttccttgttatacggtggtcggaacaagaccattgctacaccaattcag
ggtgtgtgggatatgcggggtaaacagttccatacaggcattgaggtcaaagtctgggca
attgcatgttttgctccacagagacagtgcagggaagacacactcaaagcattcacagac
cagttaaggaaaatatccagggatgcggggatgcctatacaaggccaaccttgtttttgt
aaatatgcacaaggtgcagacagtgtggaaccaatgttcaggcacttgaagaatacctat
gcaggacttcaattagtggtggttgtgcttcctggaaaaactccagtttatgcggaggtt
aagcgtgtgggtgacacattgcttggcatggccacgcaatgcgtacaggtgaaaaatgtg
ctgaagacctcgccacaaacactttccaacctctgcctgaagatcaacgtaaagctagga
ggtgtcaataacatcttggtgccacagggaaggcctgcagtgtttcagcagccagtaata
ttcttgggtgcagatgtaacacatccaccagctggggatgggaaaaaaccttccattgct
gcagtggtgggtagtatggatgctcatccaagtcgttattgtgccacagtccgtgtacag
cagcatcgacaggagatcatccaggaccttgctttcatggtcagagagctcctcatccag
ttttacaaatctacgcgcttcaagccaacacgcattatattctatagggatggcgtttca
gaaggacagtttcaacaggttctccatcatgaattgctagccatccgagaggcatgtatt
aaattagaaaaggactaccagcctggcatcacctttattgtggttcaaaagcgacatcac
accagactcttctgtactgataagaatgaaagggttggaaaaagtggcaatattccagca
ggcacaacagtagatacaaaaataacgcatccatctgagtttgacttttacctgtgcagc
catgccggcattcaaggaacaagcagaccatctcactaccatgtgctgtgggatgataac
cgcttcaatgcagatgaacttcagattctcacatatcaactttgccacacgtatgtccga
tgtacccggtcggtctccattccagccccagcctattacgctcatttggtggctttccgt
gccaggtaccatttggtggacaaggaacatgacagtgctgaagggagtcacacatctggt
cagagtaatggccgggatcagcaggctctggctaaagctgtacaggttcaccaggacacg
ctgcgcactatgtattttgcttga
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