Scyliorhinus canicula (smaller spotted catshark): 119972296
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Entry
119972296 CDS
T11175
Symbol
adgrb1a
Name
(RefSeq) adhesion G protein-coupled receptor B1 isoform X1
KO
K04596
adhesion G protein-coupled receptor B1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04115
p53 signaling pathway
scau04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119972296 (adgrb1a)
09143 Cell growth and death
04115 p53 signaling pathway
119972296 (adgrb1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scau01002
]
119972296 (adgrb1a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119972296 (adgrb1a)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
scau04030
]
119972296 (adgrb1a)
Peptidases and inhibitors [BR:
scau01002
]
Mixed peptidases
Family P2
119972296 (adgrb1a)
Membrane trafficking [BR:
scau04131
]
Endocytosis
Phagocytosis
Others
119972296 (adgrb1a)
G protein-coupled receptors [BR:
scau04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
119972296 (adgrb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AGRB_N
7tm_2
TSP_1
TSP1_spondin
GAIN
TSP1_ADAMTS
TSP1_CFP_C
GPS
TSP1_CCN
HRM
Motif
Other DBs
NCBI-GeneID:
119972296
NCBI-ProteinID:
XP_038664702
LinkDB
All DBs
Position
10:31370279..32216882
Genome browser
AA seq
1637 aa
AA seq
DB search
MRYTESAVTVIFAAALWTVSGFDPRLSPCTTLVQGKLFGYFSSSMVFASNSSACSWIIQN
PDPRRYTLYMKVVKSSNVCERRQIRTYQFDSFLASTRTYLGMESFDEVLKLCDPSARYAF
LQSSKQYLQMKQVAPGGGGRPRGRGGRVKDKEFSAEYLVVGNRNPSKAACQMLCKWLETC
LAVSTSARPCGIMQTPCSCPRGESLSQSTEMLGLNKKEDTCLKDGVYLEHCIRSPKETSE
ADSRGGWNAWSSWGDCTKSCGGGLQTRSRTCHSQLEEGFVCEGISEEGRLCNKQPCNTYG
RYNSRSQSLRSIDYRKHQDVDGFHRYGYSLSQTGDPAAEEWSPWTVCSSTCGQGTQTRMR
SCVSSPYGTSCSGPLREMRLCNNSAVCPVHGVWEEWSPWSLCSSTCGRGHRDRTRSCMQP
QFGGNPCEGPEKQTKFCNIALCPVDGNWNDWSSWSQCSATCSNGTQQRTRECNGPSFGGA
ECQGYWSENRPCFLRQCPVDGKWQKWSSWEPCTKSCDGGTQLRVRVCSGPFFGGLQCDGP
QEEYRLCNDKKCPEPHEYCQEENYNSVVWTKTPAGESAIVSCPPSAAGIILRNCVLDDEG
IAFWEPPRFTKCISNDYQMLQSETREHLSKAQRGLTGEGVSTIIRKLADTSEGGTSYSGD
ILALIDILKNVTEIFRRTYYTPVSGDIQNFVQIVSNLLSEENRPRWKEAQLTGPNAKEVM
QTVENFIDAIGFRLSDFRDSYLVTENLVICIYKRPANGATDINFPMKGWRGMVGWARNSE
DKVTVSKNVFSTGSTDPDDSSVYVIGTVLYRNLGAFLDLQRNATVLNSKIISVIMKPSPK
SLASPLEIEFSHLYNGTTNQSCIAWDETDTFAVQGVWSSRGCKTFPIDSSRTKCQCDRLS
SFAILAQLSSESNMDKVILPSVTLIVGCGVSSLTLLLLIIIYVSVWRYIRSERSVILINF
CLSIISSNALILIGQTQTRNKVICTLVAAFLHFFFLSSFCWVLTEAWQSYMAVTGRLRNR
IIRKRFLCLGWGLPALVVATSVGFTKSKGYGTVNYCWLSLEGGLLYAFVGPAAVVVLVNM
VIGILVFNKLVSKDGITDKKLKERAGQMTVPLYGMTLKCSKCGVISSAEVSATVTSNAMA
SLWSSCVVLPLLALTWMSAVLAITDRRSALFQILFAVFDSLEGFVIVMVHCILRREVQDA
VKCRVVDRQEEGNGDSGGSFQNGHAQLMTDFEKDVDMACRSVYQGEGCQRWGVEHFSTLR
KQCQDQALPVLNKDINAVRTGTLTGTLKRSMVHEEDMKMKFTHQKLSGFSSLPANVSKMH
LQGSLNYPGSLNMNEFSDHTLKINKSEQPKSIYICDGDIFKQLDSELARAQEQVIDANYV
ILPTNSSTLRPKPKDDSKYNINISQLPQTRLIHLNADSGFCAKNSPMDHVNITCNERASP
GHQTQISANETQLPNNLCDTGDSGNSGMVSKSETVSTLSTSSLESPKSQNNPSRASLNSL
QCVSVPLKRRKSRYAELDFEKIMHTRKRHQDMFQDLNRKLQHAEKDRESPTIDSKAVKRW
SVSSAGSDKTNLSQEKQTPIKRPWEGIRKIQSPPAWMKKELDSTHPSPLEMRTVEWEKTG
ATIPLGGQDIIDLQTEV
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgaggtacacggaatccgcggtgactgtgatattcgccgccgcgctgtggaccgtgagc
ggctttgaccccaggctcagcccgtgcaccactctggtccaggggaaactgttcggctac
ttctcctcttccatggtcttcgcgtccaactcctccgcctgctcctggattatccaaaac
cccgaccccaggaggtacaccctctacatgaaggtggtcaagagcagcaacgtctgcgag
cgccgccagatccgcacctaccagttcgactccttcctggccagcacccgcacctacctg
ggcatggagagcttcgacgaggtgctgaagctctgcgacccgtccgcccgctacgccttc
ctgcagtccagcaagcagtacctgcagatgaagcaggtcgcccccggcggcggcgggcgg
cccaggggcaggggcggtagggtcaaggacaaggagttctcggcggagtacctggtggtg
ggcaacaggaaccccagcaaggcggcctgccagatgctgtgcaagtggctggagacctgc
ctggccgtcagcaccagcgcccgtccctgcggcatcatgcagaccccttgctcttgcccc
aggggcgagagcttgagccagtccaccgagatgctgggcttaaacaagaaggaggacacc
tgtttgaaagacggggtctacttggagcactgcatcaggagcccgaaagagaccagcgag
gcagactcccgcggtggctggaatgcctggtcgtcttggggtgactgtaccaagtcgtgt
gggggtggattgcagacccgaagcaggacctgccattcccagttagaggaagggtttgtt
tgtgaaggaatttcagaagaaggaagattatgcaataagcagccttgtaatacatatgga
cgctataattccagaagccaatcactgaggtcaatagactacaggaaacaccaagatgtt
gacggtttccatcgctatggatactccttatctcagacaggcgaccctgcagcagaggaa
tggtccccctggactgtctgttcttcgacttgtgggcagggtacacagacccggatgaga
tcctgtgtatcatctccatatggcacctcgtgtagtggacctctgcgagaaatgagactg
tgcaacaattcagcagtgtgtccagtccacggtgtctgggaagagtggtcaccatggagc
ttgtgctcctccacatgtggaaggggtcaccgagatcgtacccgctcctgcatgcaacct
caatttggaggaaatccttgtgaaggacctgagaagcaaaccaagttctgcaacattgca
ctttgtcctgtggatgggaactggaatgattggtctagctggagtcagtgttctgccact
tgttcaaatgggacacaacagcggaccagggagtgcaatggtccttcatttggtggagct
gaatgccagggttactggtctgaaaataggccgtgctttctaagacaatgtccagtggat
ggaaaatggcaaaagtggagcagttgggaaccatgcaccaaaagttgtgatggtgggaca
caacttcgagtgagggtatgctctgggccattttttggaggactgcaatgtgatggacct
caagaggaatacaggttgtgcaatgacaaaaaatgcccagaacctcatgagtattgtcag
gaagaaaattacaattctgtggtgtggacaaagacaccagccggagagtctgcgatcgtc
agctgtccaccaagtgctgcaggaataatcctgagaaattgtgtcctagatgatgagggg
atcgcgttttgggagcctccacgttttaccaaatgcatttccaatgactaccagatgctg
cagtcagagacaagagaacacctgtctaaagctcagcgaggattaactggggaaggtgtg
tcaacgatcataagaaagctggcagacacgtccgagggagggaccagctacagtggagac
atcctagccttaattgacattttgaagaacgtgacagaaatcttccgcagaacctattac
actcctgtctctggagatattcagaattttgttcagatagtgagcaatttgttatcagaa
gaaaatcgaccaagatggaaagaagctcagctgactgggccaaatgcaaaggaagtgatg
caaaccgttgagaattttattgacgctattggctttcgactgagtgacttcagagattcc
tacctcgtcacagaaaatctagtgatatgtatttataaacgcccagccaacggagcgaca
gacatcaacttcccaatgaaaggatggagaggaatggttggctgggcaaggaattctgaa
gataaagttactgtttccaaaaacgtcttttcaactggatcaacagacccagacgactct
tcagtttacgtgataggaactgtcctctatagaaacctgggggcatttctggatcttcaa
aggaatgccacggtgttgaattccaagataatctctgttataatgaagccttctccaaaa
tctctagccagccctttggaaattgaattttctcatctatataacggcacaacaaaccag
tcgtgcattgcgtgggatgaaacagacacctttgccgttcagggggtctggtcgagccgc
ggctgcaagacgttcccaattgactcgtcacgtacaaaatgccagtgtgaccgtctctcc
agcttcgccattttggctcagctctcctcagaatcgaacatggacaaagtgatcctgcct
tccgtcactctaatcgttggttgtggagtttcctcattgactctcctgctattaatcatt
atttatgtatctgtctggaggtacattcggtcagaacggtcggtaattttaataaacttc
tgcctgtcaatcatttcatcaaatgctctcatcctgataggacaaactcagacaagaaat
aaggtgatctgtacccttgtggcagcgtttctgcatttcttcttcctgtcatcattttgc
tgggtgctgacagaagcctggcagtcatacatggctgtcacaggaagattacgaaatcga
atcattcggaaacgttttctttgtcttggatggggacttccagccctagttgtcgcaaca
tctgttggattcaccaaatcaaagggatatggaacagtaaactattgctggctttccttg
gaaggtggacttctctacgcctttgtgggacctgcagccgttgttgttttggtgaacatg
gttattggcattctggtatttaacaaacttgtatccaaagatggaataacagataagaaa
ctgaaggaacgggcaggtcagatgacagttcccctttacggtatgacgctcaaatgttcc
aagtgtggagttatatcttcagctgaagtatcggctacagtcaccagtaacgccatggca
tctctttggagctcttgtgtggtcctaccacttttagcgttgacctggatgtctgcagtg
ttagccatcacagatcgaagatcggccctctttcagatcctctttgctgtctttgactct
ttggaaggctttgtcattgtaatggtccactgcattttgagaagagaggttcaggatgcg
gtgaagtgtagagttgtagatcgacaagaggaggggaatggagactctgggggatcattt
caaaacggacatgcacaattaatgactgactttgaaaaggatgtagatatggcatgtcga
tcagtttatcaaggtgaaggatgtcagcgctggggagtggaacacttttctactttgaga
aagcagtgtcaggatcaagcactcccagttttaaataaagatatcaacgccgtccgaaca
ggaacactcacggggactctaaaacgctcgatggtccacgaggaagacatgaaaatgaaa
ttcacccatcagaagttgtccggtttctcgagtcttccagccaatgtgtcgaagatgcac
ctccagggatcactgaattacccaggatcgttaaacatgaatgagtttagcgaccatacc
ttgaaaataaataagagtgaacagccgaaatcaatatatatatgcgacggtgacattttc
aagcaattagactctgaactcgcacgagcacaggaacaagtgatagatgctaactatgtt
attttgcccaccaactcctccacgctgaggcccaaaccaaaagacgatagcaaatataat
attaacattagtcaattgccccagactagacttattcatctgaatgcagacagtgggttt
tgtgcgaaaaactcaccaatggatcatgttaatattacttgcaatgaaagggcttctcct
ggccaccagacacagatttcagcaaatgaaacacagctccccaataacctgtgtgacaca
ggtgattcagggaactcggggatggtgtccaaaagcgagacagtttctacgctatccact
agctcgttggagagccctaaatcccagaataatcccagtcgcgcctccctgaactctctc
caatgtgtcagtgtaccgttgaagagaagaaaatctaggtatgctgagttagattttgag
aaaataatgcacacaagaaaacggcatcaagacatgtttcaggatctgaacaggaagctt
cagcatgctgagaaagatcgagaatctcccacaatagacagcaaagcagtgaaacgttgg
agtgtttcatcagcaggaagtgataaaaccaatctcagtcaagagaagcagaccccaatc
aagcggccttgggaaggaatccgaaagatacagtctccacccgcatggatgaaaaaagaa
ctggattccacccatccgtctcccttagaaatgaggacggtggaatgggagaaaacggga
gcaacgataccactcggcggacaggacatcattgatcttcagactgaagtctga
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