Scyliorhinus canicula (smaller spotted catshark): 119972324
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Entry
119972324 CDS
T11175
Symbol
myd88
Name
(RefSeq) myeloid differentiation primary response protein MyD88
KO
K04729
myeloid differentiation primary response protein MyD88
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04620
Toll-like receptor signaling pathway
scau04621
NOD-like receptor signaling pathway
scau05132
Salmonella infection
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119972324 (myd88)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119972324 (myd88)
04621 NOD-like receptor signaling pathway
119972324 (myd88)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119972324 (myd88)
09171 Infectious disease: bacterial
05132 Salmonella infection
119972324 (myd88)
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Gene cluster
GFIT
Motif
Pfam:
Death
TIR_2
TIR
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-GeneID:
119972324
NCBI-ProteinID:
XP_038664774
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Position
10:46072673..46100981
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AA seq
291 aa
AA seq
DB search
MASCEKKIGEPADSPGTIDFFSIPLIAVNFAVRKRLALFLNPKSMVAANWPELAEEMGFD
YLEIKNYERFDNPTGKLLEDWQVKEGSSVGRLLELLQKIERDDILEDLTPLIEEDCKRYL
NKPLQVPSVDSSEPKTPASIGITTGDDPTGIAPELFDAFICYCQADIEFVHEMIKQLEQS
DYKLKLCVFDRDVLPGSCVWTISSELIEKRCKRMVAIISDDYLVSDDCDFQTKFALSLSP
GARDKRLIPVKYKPIKRKFPSILRHITICDYTNPSTKTWFWKRLAKALSQP
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctgtgagaagaaaatcggggagcccgccgactcgccggggaccattgacttc
ttttccattcccctgattgctgtgaacttcgcggtgaggaagcggctggctctgtttctc
aatcccaagagcatggtggcggccaactggccggagctagccgaggagatgggctttgac
tacctggagattaagaattacgagcgattcgacaaccccaccggaaaactgctggaagat
tggcaagtgaaggaaggttcttccgtgggcaggttacttgagctactccagaagatagaa
cgtgatgatatccttgaagacctcacaccacttattgaagaggactgtaagcgatacctc
aacaaaccacttcaagtgccatcagtggatagcagtgagcccaagaccccagcttcgata
ggaattacaacaggagatgaccccacaggaattgcacccgagttgtttgatgccttcatt
tgttattgtcaagccgacattgagtttgtccacgagatgatcaagcagcttgagcagtct
gattacaaactgaagctgtgtgtatttgatcgtgatgtgctgccggggtcatgtgtctgg
accatctccagcgagcttattgagaaaaggtgtaaaaggatggtggcgataatctccgat
gactatttggtcagcgatgattgtgattttcaaacaaagtttgctctgagtcttagtcca
ggtgctcgagacaagcgtctgatccctgtcaagtacaagccaattaagaggaaattccca
agcattctccggcacatcacgatctgtgattacacaaacccaagcaccaaaacatggttc
tggaagagactcgctaaggcactttcacaaccatga
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