Scyliorhinus canicula (smaller spotted catshark): 119972411
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Entry
119972411 CDS
T11175
Name
(RefSeq) RNA-binding protein 12-like isoform X1
KO
K24526
RNA-binding protein 12
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119972411
Spliceosome [BR:
scau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119972411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
119972411
NCBI-ProteinID:
XP_038664966
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Position
10:59644913..59652189
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AA seq
734 aa
AA seq
DB search
MAVVIRLQGLPASAGTLDIRHYFSRLTIPDGGVHIIGGELGDAFIVFATDEDARLALLRS
GEFLKGNRTKLTLSSRNEMQSTIEMSRMRYTRSSGETSSYERSGFGNSGMGGLGSISSTL
AENLVAAMKHGINRNVFHPSDIGSSDMNNYGSHVDPMMSGTMSAMALSSPQNIPGTPSSM
SALFGMSSRAMSDSLDKFNGSGAMDPFDNSVYPTQRREQGAFNSDDVYLRLQGMPYSARE
LQVREFFHGLQVEAVNLKTDHRGLNNGVGFVRFATPWDAAEGLKRHKKYMGQRFVEVYRA
TKLEWISEGTGLFTEDRHYDLNRDNRGRSPREEKHFRSRTRSRSPRRHRSRSRSPHDQDY
WVQLKNIPYGTSKRDVRNFFDKMNITGDQIFLVYDDHGKIVKKGFVKFKNAVEYHNALRY
HKKCIAHRAIYLYPIAKKAMLKLVYNIKQRSREKSTSRSEEKGYQSREGAYSSSRLYIYV
RNLPFDISKSEIYKFFEEFGVADHGVQILVDSNGLGLGEALVKFKSEDEVLRAERLCGKR
LGGREVVLKLVASEEVLGVGSVHDRTKGQKESDYFSSYDRGGDHSSHDMHELEKYLFESS
GNMDSVSSMPGPRYGQEEGLYGGFNTGNSNFGSHSGGGFGSRFDSGYQGHMGMSNGMAVV
KACNLPFKFSVDEILDFFYGYRVIPESVTVRYNEKGLPAGDAVIAFETVAEAMAAVRELN
EKPIGKRNVKLSLL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcttgcaggggctcccagcttctgcagggaccttggatattcgt
cactacttctctagattaaccattcctgatggaggggtgcatataattggtggtgaactg
ggagatgcattcattgtatttgctacagatgaagatgcacggcttgctttgctgagatcg
ggtgaatttcttaaagggaacagaacaaagctaacactaagtagcagaaatgaaatgcag
agtacgattgagatgagtcgtatgagatacacacgctccagtggagaaacatcaagttat
gaaaggtcgggattcggcaattctggcatgggtgggttaggtagcatatcttccacccta
gctgaaaacttagttgcagctatgaaacatggaattaataggaatgtatttcaccccagt
gatattggaagttctgatatgaacaactatggctctcacgtggatcctatgatgagcggt
actatgtctgcaatggctttatcttctccacagaacattcctggtacaccttcttccatg
tctgctttatttggaatgtcttccagagcaatgagtgatagtttggataaatttaatggc
tctggggcaatggatccctttgacaattcagtttaccccactcaaaggagagaacaagga
gcttttaattctgatgatgtttacttgcgtttgcaaggcatgccatattctgcaagagaa
ctgcaagtaagagaattcttccacggtttacaagttgaagcagttaatctaaaaactgat
catcggggtctgaataatggagtgggttttgtacggtttgctactccttgggatgctgct
gaagggctgaagcgccacaagaaatacatgggacagagatttgtggaggtgtatcgagcc
accaagcttgaatggatttcagagggcacgggtttgttcacagaagataggcattacgat
ctaaatcgagataatagaggtcgttcccctcgagaagagaaacatttccgttctcgaact
cgatcaagatcacctcgaaggcacaggtcacgatcccgttcgcctcatgatcaagattat
tgggtgcagttgaaaaatatcccctatggcacctcaaaaagagatgtacgaaatttcttt
gacaaaatgaatataacaggtgaccagatttttcttgtatatgacgaccatggtaaaatt
gttaagaagggttttgtgaagtttaaaaacgctgttgaatatcataacgctctaagatac
cataagaaatgcattgcacatcgggcaatttatctgtatcctattgctaaaaaagccatg
ttaaagttggtttacaatattaagcaaagatcaagagaaaaatctactagcagaagtgaa
gaaaaaggatatcagtccagagaaggagcatactcctcatcaagattgtatatttatgtt
cgtaaccttccatttgatatctccaaatccgagatctataaattctttgaagaatttggt
gtggcagatcatggggtccaaatacttgttgatagtaatggccttggactaggggaggct
ttggtcaagttcaagtctgaagatgaagtactaagggctgagcgcttatgtggtaaaagg
cttggcggacgcgaagttgtgctaaagctggttgcttcagaagaggtgcttggtgtcggt
tctgtgcatgacagaacaaaaggtcaaaaggagagtgattacttcagttcatatgatagg
ggtggtgatcactcatctcatgatatgcatgaattagaaaagtatttatttgaatcttct
ggtaatatggattctgtgtcctccatgccaggacccaggtatggccaagaagaaggactt
tatggaggttttaacactggaaacagcaattttggcagccacagtggaggaggatttgga
tctcgatttgattccggctatcaaggtcacatgggaatgtccaatggcatggctgttgtg
aaagcttgcaatctgcctttcaaattctctgttgatgaaatactggacttcttctatggt
tatcgtgttattccagagtctgtcactgtacggtacaatgagaaggggttacctgcaggc
gacgcggtaattgcatttgaaacagttgctgaagcaatggctgccgttcgtgaactgaat
gagaaaccaattggaaaaagaaatgtcaaactaagcttgctataa
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