Scyliorhinus canicula (smaller spotted catshark): 119972554
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Entry
119972554 CDS
T11175
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119972554 (chd7)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119972554 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
CHDCT2
DEAD
Chromo_MIT1
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
119972554
NCBI-ProteinID:
XP_038665366
LinkDB
All DBs
Position
10:101204231..101526991
Genome browser
AA seq
3008 aa
AA seq
DB search
MADPGMLSLFGDDGNIFSEGLEGLGECGFSENPVNALGQQLPMDQGFGSMQSPLHHPPPT
QTQTKLAHYDHFGPFEQQKIHLVDQPNRMIGNTPGNGMASPHSQYHNPSVPPVPHSGAQM
GVYPTMQNERCGQQFVDSSSMWGPRAVQVPDQTRPTFQQQQPQPPPQGQGHAQHMQQLGN
YLTRSDYSLQQHNQPQQQRVNQFTQGQEALSQGNPFMGTSGPGHLSHMPQQTPNIGPSLR
HTPTQQYHPHPPPPNSLHGDSIAHSPRFSPNPSQQASSRQQNLNFSSRSQAVPSQSVSSS
GQYSQYPYSSINQGLVNSNTGINQNLGLNNNPSVNQSIPRYPNTVGFPAGTNQGLMHQQP
IHPGGPLNQINAQTMHPTQSQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGMQLEVGS
YSSMPLPQQPHQSPGTMGLGQRSIGPRSMQTQQYINPSVPRDIGSLPRPVGALGPSGNHA
DQVMQERLMSGQQHPNQPFQPQLPTCPPVKQHPTVHHQTSPTSHQHQPWVQSQHSSPKAT
LQQVPAQHQSLSNTPSDMTQISGQNSQLASGEERQKSLDQQRMQEKANRIVAEAIAKAKA
RGEQNIPKVIDQLVISSTAVDGSTEEKKKKKKKPKEKKDPKESKETKDKKPKSTATKIKS
NKNARHVLRFEWRRQQMHKLAAQHVLEFPCLFNKKNTPESTVGKKKGKRKHDSSPENSDM
DKTPPPSPQEEDELGVQKRRSSRQVKRKRYTEDLEFKISDDDDAGKDSPLSTSQSEQESA
AGPVTEKILSMRLMKKTTESGEEVEVEELFVKYKNYSYLHCQWTTVEQLAKDKRIHQKIK
RFKAKQAQMNKFLAEVEDEPFNPDYVEVDRILDVSYSTDKDSGESITHYLVKWCSLPYEE
STWELKTDTDQVKIEEFHQLQSVKPRTEHTERPLAEFWTKLEHSTDYKNGNQLREYQLEG
VNWLLFNWYNSQNCILADEMGLGKTIQSITFLYEMYLKGIHGPFLIIAPLSTITNWEREF
HTWTAMNVTVYHGSQASRQMIQAYEMYFRDTEGHITQGAYKFHAIITTFEMILTDCPELR
NIAWRCVIIDEAHRLKNRNCKLLEGLKLMDLEHKVLLTGTPLQNTVEELFSLLNFLEPLR
FPSETNFLQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQK
KYYRAILERNFTFLSKGAGQTNVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNP
ETPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRHLYER
IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQ
AQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENSANGVQQL
SKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTFAKASFV
ASGNRTDISLDDPNFWQKWAKKAELDIDAINGRNNLVIDTPRIRKQTRHYNAIKEDELME
FSDLESDSEEKTGKPLRRPQDRSHGYPRTECFRVEKNLLVYGWGRWSDILSHGRFKRQLT
EHDVETICRTILVYCLNHYRGDEKIKGFIWDLITPTEDGQTRALQNHSGLSAPVPRGRKG
KKVKSQSTQPVMKNADWLVNCNPDILLHDDGYKKHLKHHCNKVLLRVRMLYYLRQEVIGD
VAEKIFDGADASDIDIWIPEIDHAELPTDWWDREADKCLLVGVFKHGYEKYNSIRADPLF
CFLERVGMPDAKAMAAEQRGTDVLADVSDGADFDREDEDPEYKPGRIPFKDEMDEFENSP
QDDKEECMDAENSGKQLDQDDESDKLYWPNTSVLTTRLRRLITAYQRSYKREQMKLEALN
KSDRRRRRPRDEVRAREAERNAAISEKRQRWTRREEADFYRVVSTFGVVFDPIKKQFDWN
QFRAFARLDKKSDDSLEKYFSCFVAMCRKVCRMPPNPGEESDSTIFIEPITEERASRTLY
RIELLRKVREQVLLHAQLDERLKLCQPSMDLSEWWECGKHDKDLLIGAAKHGVSRTDYHI
LNDTELSFLDAHKNFAQNKGASQRSSTPFQNQPGACLSQMPSVVPSTSVQEEKSTGHSDY
DDDKTEDGLKCPTPPSQEEQSAVPLKEHGKTNCDEKIHVDSKCQDITRPLSVKVEHDTEE
ILPMNTELLADTEEKELSPKLAFEKGSEEDDDDEEEDDDDKSEESSQPEAGTASHGKHFD
EESNASLSTARDETRDGFFMEDSEPTVAQLLHERTYSFSFWPKDRVMINRLDNICETVVK
GKWPINRRQPFDFHGMINYTPTSVESPLPRRSFTELSMVGQGSFSACEDIAGSPQVSRDD
ALNLSVPRQRRRRRKKIEIEAERAARRRNLMEMVAQLRESQAASDSGQERAVDLSKASRE
AKSSTSVSNLSINSKYVLPNASVPVSDAYKAHIEMLQAGLSRTPTGLMINGSLVDGEMPI
KRRRGRRKNVEGLDLLFMNNKRTSLSADDAEVTKAFEESTQSASQPRSIPSPGQLDPEAH
IPVINLEDGTRLVGEEAPKNKDLVDWLKIHPAYTVDMPSYVPKSGEVLLTPFQKPKQKRH
RCRNPNKLDVNTLTGDERVPVVNKRNGKKMGGAMAPPMKDLPGWLEENPEFAVAPDWADV
VKQSGFLPESMFDRVLTGPVVREEGASRRGRRPKSEIAKAAAAAAAASASGINPLLMNSL
FAGMDLASLQNLQNLQSLQLAGLMGFPSSLATAATGGDAKNPASLLPLMLPGMAGLPNMF
GLGGLLNNPLTATASTSSATSGPSETESGISSKTENDKENDKENEDKEINNAESTVDSNN
ASSSSFTAPATTGLSNNPLAFNPFLLSTMAPGLFYPSMFLPPGLGMTLSGFPHTTLAGLQ
STIGSNDDKEDTTDGKTEDNSFIEGEANSDDSDPMGSPSKPADSSLVEDELAQVTGLDSV
EGEDDDED
NT seq
9027 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctggcatgctgagtttgtttggtgatgatgggaacattttcagtgaaggg
cttgaaggtcttggagaatgtggtttttcagagaatccagtgaatgctcttgggcaacag
ctacccatggatcaaggatttggctccatgcaatcgcccctgcatcatcccccacccact
cagactcaaactaagctggctcattatgatcattttggtccgtttgaacagcagaaaata
catctggtagatcagcctaatcgaatgattggtaatactcctgggaatggcatggcatcg
cctcactcacagtaccacaatccctcagttccaccagtccctcacagtggtgctcagatg
ggagtgtacccaactatgcagaacgaaaggtgtggacagcaatttgtagacagcagctcc
atgtggggaccacgtgctgtccaggtgccagaccaaacccgacctaccttccagcagcag
caaccacagccaccacctcaagggcaagggcatgctcagcatatgcaacagctggggaat
tacctgacacgtagtgattattcattgcaacagcacaaccagccacagcagcagagggtg
aaccaattcactcagggtcaagaagccctcagtcagggaaatcctttcatgggaacttca
ggaccaggtcacttgtcacacatgcctcaacaaacccccaacataggcccttccttacgt
cacactccaactcagcaataccaccctcatccccctccccccaattctctccatggcgat
tccattgctcacagtcctagattctcccctaacccttctcaacaagccagcagcaggcaa
caaaatttaaactttagctcacgtagccaagcagtaccttcacaatctgtaagtagctca
gggcagtattcacaatatccttatagtagcattaatcagggattagttaacagtaataca
gggatcaatcaaaacctaggccttaataataacccatctgtgaaccagtcaataccccgc
tatccaaatactgtgggattcccagctggcaccaaccaaggactaatgcaccagcagcct
atacatccaggtggcccacttaaccaaattaatgcacaaactatgcaccccacacagtct
cagggaacttacgcttctccacctccaatgtcacctatgaaagctatgagtaacccagca
gggacccctccaccacaggttaggcctggcagtgctggaatgcagttggaggttggaagc
tattcaagcatgcctctgcctcaacagccacatcagtccccgggtaccatgggacttgga
cagaggagcattggtcccaggagcatgcagacacaacagtacataaacccttctgtacca
agggatattggcagccttccaagaccagtcggtgcactgggtcccagtgggaatcatgct
gatcaggtgatgcaggagcgtctaatgtctggccagcagcacccaaatcagccttttcag
cctcaattgccaacttgtccacctgtgaaacagcatccaactgtgcatcatcaaacttct
cctacatctcatcagcatcagccatgggttcagtcacaacattcttcacctaaggccaca
ttgcaacaagtgcctgcccaacatcagtctctttcaaatactccatcagacatgacgcag
attagtggacaaaattctcagttagcaagcggagaagagcgacagaagtcactggaccaa
cagcgcatgcaagagaaggccaatcgtattgtggctgaggccattgctaaagcgaaagct
cgcggtgaacaaaatattcccaaggtgattgatcagctggtgatctctagcactgcagtg
gatggttcaactgaagagaaaaagaaaaagaagaaaaaaccaaaagaaaagaaagacccc
aaggagtccaaagaaacaaaggataaaaaacccaagtcaacagcaactaaaatcaaaagc
aacaagaatgcaaggcacgttcttcgttttgaatggaggaggcaacagatgcacaaactg
gcagcacagcatgttctggaatttccctgtcttttcaacaagaaaaatacaccagaatca
acagttggaaagaaaaaaggcaaaaggaaacatgactcttcccctgaaaattcagatatg
gacaaaacgccacctccatctccacaggaagaggatgaattgggagtgcagaagcgtcgc
tctagtcgacaagtgaaaagaaagcgatatacagaggacctagaatttaaaatatctgat
gatgatgatgcaggaaaagattcaccattaagcacttcacagtccgaacaggagtctgca
gctggtccagttactgaaaagatcttgagcatgcgactaatgaagaaaactaccgagtct
ggagaagaagtggaagtagaagaattatttgtcaaatacaaaaactattcttaccttcat
tgtcaatggaccacagtggagcagctggcaaaggacaagagaattcatcagaagattaaa
cgcttcaaagcaaagcaggcacaaatgaataaatttctcgctgaggttgaagatgaacct
tttaatccagattatgtagaagtagatcggatacttgatgtttcatatagcactgataaa
gatagcggggagtcaattacccattatttggtgaagtggtgttctcttccatatgaagaa
agcacttgggaactgaaaacagacacagaccaagtcaagattgaagaatttcaccaacta
cagtctgtgaaaccaagaaccgagcatacggaacggccgcttgcagaattttggacaaaa
ttggaacattcgacggattataaaaatggcaatcaactcagggaatatcaactggagggc
gtaaattggctactcttcaattggtacaacagccaaaactgtatattggccgacgaaatg
ggattagggaagactatccaatctattacatttctgtatgaaatgtacttgaagggaatt
catggccccttcctgattattgcacccctttccacaatcactaattgggagagggagttc
cacacttggacagcaatgaatgtgactgtgtaccatggtagccaggctagccgccaaatg
attcaggcctatgagatgtacttccgggatactgagggtcatatcactcagggagcatac
aaattccatgccatcatcactacatttgaaatgatcttaactgattgcccagaactgcgc
aatattgcatggcgttgtgtaataattgatgaagcccacagactgaagaaccgaaactgc
aaacttctggaaggattgaagctaatggatctggaacataaggtactgctgactggaaca
ccattacagaacactgtagaagagcttttcagtttactaaacttcctggaacccttgcga
ttcccttcagagaccaactttctccaagagtttggtgatctgaaaactgaggaacaggta
caaaaacttcaggctattttgaaaccaatgatgttaagacgcttgaaagaagatgtagaa
aaaaatctagctccaaaagaagaaaccatcattgaagtagaactgaccaacattcaaaaa
aaatattaccgtgctattttggaaagaaattttactttcctctctaagggagctggtcaa
accaatgtgcccaaccttctgaacactatgatggaactgagaaagtgctgtaatcatcca
tacttaattaatggtgctgaagaaaagattttggaggagtttaaagaaacacacaatcct
gaaacaccagattttcaacttcaggctatgatccaagctgctggcaagttagtactgatt
gacaagttactgccaaaactaaaggctggtggccacaaggtgcttatattttcccagatg
gtgcgctgtttggatattcttgaggactacctcattcagcgaagacatctgtatgagcgt
atagatggccgtgtgaggggaaatcttcgacaggcagcaatcgatcgtttctctaaacct
gactcagatcgttttgttttcttgctgtgcactcgtgctgggggtttggggattaacctt
actgctgcagacacttgtatcatctttgattctgattggaacccacaaaatgacctccag
gctcaggctcgatgtcacagaattgggcaaagcaaagcagtgaaagtatataggttaata
accaggaactcttatgaaagagagatgtttgataaggcaagtctgaaacttggactggac
aaagctgttctgcagtccatgagtggaagagaaaatagtgctaatggggttcagcagcta
tctaagaaggagattgaggatcttcttagaaaaggagcatatggggcactgatggatgaa
gaggatgaagggtcaaaattctgtgaagaagatattgaccagattctcttgaggcgtact
cacacaattactatagaatctgaaggaaagggttccacttttgcaaaggccagctttgta
gcttctgggaataggaccgatatttcccttgatgatcccaatttttggcagaagtgggca
aagaaagctgaattggatattgatgcgataaatggaaggaacaatttggtgattgataca
ccaagaataagaaaacagacaagacactacaatgctattaaagaagatgaactaatggaa
ttttcagatttggaaagcgattctgaagaaaagactggaaaacccctccgcagaccacaa
gataggtcccacggttatccaaggactgagtgttttagagtagaaaagaacctgttggtg
tatggttggggccgatggagtgatattctttcacatggacgttttaaacgacagttgaca
gaacacgatgtggagaccatctgccgcactatccttgtgtactgcttgaaccattacaga
ggagatgaaaagatcaaaggatttatatgggatctgattactcctacagaggatggacag
actcgagctctgcaaaatcactccggtttgtctgcaccagtaccgagaggaaggaaagga
aagaaagttaaaagccagtccacgcaaccagttatgaaaaatgctgattggctagtgaac
tgcaacccagatatcttgctgcatgatgatggctataagaaacacctgaaacaccactgc
aacaaagtcctgctgcgggtacggatgctgtattatttgaggcaggaagtgataggagac
gtagcagaaaagatattcgatggtgcagatgcaagtgatatagatatctggatcccagaa
attgaccatgctgaacttcctacggattggtgggacagggaagctgataaatgtcttctc
gtcggcgtgttcaaacatggatatgaaaaatataattccataagggcagatcctttattc
tgcttcctggaacgggtgggaatgcctgatgcaaaggctatggctgcagaacagagggga
acagatgtgctggcagatgttagtgatggtgctgattttgacagagaggatgaagatccg
gaatataaaccaggcagaattccatttaaagatgaaatggatgaatttgagaattctcca
caagatgacaaggaagaatgtatggatgctgagaattcgggcaaacaacttgatcaagat
gatgaatcagacaaactctactggcccaacacatcagttctcacaacacgcttgcgccgc
cttattacagcctatcagcgcagctataagagggagcagatgaaattagaagcactgaac
aaaagtgatcgtcgcaggcgtcggccgagagatgaagtgagagctcgggaggcagagaga
aatgcagctatatctgagaaacgtcaacgatggaccaggagagaagaagcagacttctac
cgcgttgtatcaacctttggtgtggtttttgatcctatcaaaaagcagtttgactggaac
cagttccgtgcctttgctcgactggataaaaagtctgatgacagtttggaaaaatacttc
agttgttttgtggctatgtgcagaaaagtgtgtcgtatgcctccaaatccaggtgaagag
tctgattccacgattttcattgagccaatcacggaagaacgtgcttctagaaccttgtat
cgaatagaacttctacggaaggttcgagagcaggttttgcttcacgctcagctagacgaa
cggctcaagttgtgccaaccaagcatggatctgtctgaatggtgggagtgtggcaaacat
gacaaagacttattgattggtgctgcaaagcatggagtcagtaggacagactatcatatt
ctaaatgataccgaactttctttcctggatgcccataaaaattttgctcaaaacaaaggg
gctagccagcggagcagtacgcctttccaaaaccaacctggtgcctgtctgagccaaatg
ccttctgttgtcccttccacatctgttcaagaagaaaaaagcacaggacacagtgactat
gatgatgataaaactgaagatggactaaaatgtcctacaccgccatctcaggaagagcag
agtgcagttcctcttaaggaacatgggaaaaccaattgtgatgagaaaatacatgttgat
tcaaaatgtcaggacatcaccagaccattgtctgtgaaggttgagcatgatactgaagag
attttacccatgaatacggaattgcttgccgacactgaagaaaaggaattgagccctaaa
ttagcatttgagaaggggtcagaagaagatgatgatgatgaggaagaggatgacgatgat
aaatcagaagagtcatcccaacctgaagctggcactgcttcccatggcaaacattttgac
gaagaaagtaatgcatctttgagcactgcccgtgatgaaactcgtgacggcttcttcatg
gaagatagtgaacccacagtagctcagctgcttcacgaaagaacatattctttttccttc
tggccaaaggatcgtgtaatgattaatcgcttggacaacatatgcgaaacagtagtcaag
ggaaaatggcctataaataggcgtcagccatttgattttcatggtatgatcaactataca
cccacatcagtggaaagccctttaccaaggaggagtttcactgaactctccatggtaggt
caagggagcttcagtgcctgtgaagatatagctggttctcctcaggtatcaagggatgat
gcattgaacctgtcagttccaaggcaacgcaggagacgacgaaagaagattgaaatagaa
gccgagcgagctgcaaggagaagaaacctgatggaaatggtagctcagcttcgtgagtcc
caagcagcctcagacagtggtcaggagagagctgtggacttatcaaaagcctccagagag
gcaaaaagttctacctcagtcagtaacctttctattaattccaagtatgttttgccgaat
gcctctgtgccagtatctgatgcctataaagcccacatagaaatgctgcaagcaggcctt
tcacgaacaccaactggacttatgataaatggttcattagttgatggagaaatgccaata
aaaaggagaagaggcagaaggaaaaatgtcgagggtcttgatctcctatttatgaataac
aaacggacttcattaagtgcggatgatgcagaagtgaccaaagcttttgaggagagcaca
cagtcggcatcacaacctagaagcattccatcccctggtcagttggaccctgaggcacac
atccctgttattaatttagaagatgggaccagactggtgggagaagaagcccccaaaaat
aaagatttggtggattggctgaaaattcatccagcttatactgtggatatgcctagttat
gtaccaaagagtggagaggtgctgttaaccccatttcaaaaacctaaacagaaacggcat
cgctgtagaaatcctaacaaactggatgtgaacactttgacaggagatgaaagagtacca
gttgtcaataaaagaaatgggaaaaagatgggtggtgccatggccccaccaatgaaagat
ctgcctggatggcttgaagaaaatcctgagtttgctgttgcacctgattgggctgatgtg
gtcaaacagtctggttttctaccagagtccatgtttgaccgtgttctcactggacctgtt
gttagagaggagggtgcaagtagaagagggagaaggcctaaaagtgagattgccaaagct
gctgcggccgcggctgctgcttcagcctcaggaataaacccactactgatgaacagtctc
tttgctggaatggacctagcgagcctgcagaatttacaaaacctgcaaagtcttcagtta
gctggattgatgggcttcccttcaagtcttgctacagctgctacaggaggagatgcaaaa
aacccagcttctttactaccactgatgcttccaggcatggcagggctgcccaatatgttt
ggacttggaggcttgttaaacaaccccttgactgctacagctagtacttcctcagcaaca
tccggcccgagcgaaacagaaagtggcatttcatctaaaacagaaaatgataaagaaaat
gataaagaaaatgaagataaggaaataaacaatgctgaatctacagttgattctaataat
gcaagttcaagttctttcacagctcctgccactactggactatctaacaaccctcttgct
ttcaacccattcttgctttccactatggctccgggattattctacccatctatgtttctt
cctcctggtctgggaatgactttgtctggttttcctcatactacactggctggactacag
agcacaataggctcaaatgatgataaggaggatacgacagatggcaaaactgaggacaac
agttttattgaaggggaggccaattcagatgacagtgatcctatgggaagccctagtaaa
ccagcagattcctcccttgtggaagatgaattggcacaggtgacggggttggactcagtt
gaaggagaagatgatgatgaggattaa
DBGET
integrated database retrieval system
