Scyliorhinus canicula (smaller spotted catshark): 119972585
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Entry
119972585 CDS
T11175
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scau01002
]
119972585 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119972585 (vcpip1)
Enzymes [BR:
scau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119972585 (vcpip1)
Peptidases and inhibitors [BR:
scau01002
]
Cysteine peptidases
Family C64
119972585 (vcpip1)
Ubiquitin system [BR:
scau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
119972585 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
119972585
NCBI-ProteinID:
XP_038665439
LinkDB
All DBs
Position
10:complement(106992016..107072358)
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AA seq
1204 aa
AA seq
DB search
MLQGSKKKDKRILSGTCPDPKCQARLFFPAYGVSIECTECGQRHEQRNLLNVEEVTDPDV
VLHNLLRNALLGVTAPKKGTEMVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLRAMNQ
GEMFDCALLGDRAFLIDAEHIGTMGYGKDRSGSLLYLHDTLEEIKKANSNQECLIPVHVD
GDGHCLVHAVSRALVGRELFWHALRENLKQHFKLNLDRYKALFHDFIDAAEWEDIINECD
PLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSCGDYSATFLPGLVPEEKCWG
KDGQLNKPICIAWSSSGRNHYIPLVGIKRGPLPRLPLKLLPKAWGVPQELIRKYIQFDDD
SCTLGGDRSLQDKYLQRLVAAMEEIFLKTHDIHPSLVADVHQYIYRRTGVIGIQPEDVTE
AAKKAVIENRLQKCLICGALSELHVPTEWLAPGGKLYNLATSTHGQLKPDKNYSFPVNHL
VCSYDPKEDVLVPDYNLSHLTSCNWCHGTSMRHVRGDGSVVYLDGDRTNARSAGGKCGCG
YKHYWEGKEYDNLPEAFPITLEWNGRVVRETVYWFQYESEVALNSNVYDVAMKLVTKHFP
GEFGSEILIQKVVNTILHHTAKKNPDEYTPVTVEGAHSRRVGDLQDEPASEPHLPTKIIL
MGQKSKTLHKEELNMSKTERGIQQNIIDHAAIVQKRKTDKLRQDQKVPGQPSSPGIIKDG
SSSAPATPIKSPYSASPTKEKKIRVTTSDGRQATLTLQASVTFSEFQESIAKEFNLPPHL
QCIRHGFPPKELHPPKVGWENEVLPLQHGDRVSVEILKDSKEPVPAASTSAAHSWKTEEP
EASGRGSVKDMQDHIDLEMSSLCLLATLMGEDVWSYAKKLPHLFEQGGVFYNTMKKDVGL
ADGKHFTLPHLPGKTFVYNGTDDRLELCIDPAGHIPIGPDIDNLIKEALSQLRSEGGSRS
REGSPSSHGGMKLGSGGVVRKKSEQMPNVTAFQGKGHSLGTASSSPQLEQRHSREMQVPR
KQSTGSSSGADLSYGIGRSSPKHGASPPKSSSGDSQLIRMAPGFVTMRDGRQLDPNLIEA
QRKKLQEMVSSIQASMDKHLKDQNAEQSVPNEVPESKVHSTTSSVQLIMRTESLHTDALE
TPSITPQAGDNENLSMETTSVGVELLSHPSIPSSKAQNGNLLNEDLEEMDSQEIEGTIEP
MDHS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaggatctaagaaaaaagacaaacgtattctgtcgggtacgtgtccggatccc
aagtgccaggctcggctgtttttcccagcctatggagtcagtatagaatgcaccgaatgc
ggccagcgccatgaacaaagaaacctgctcaatgtagaggaagtcaccgacccagacgtg
gtgctgcacaacctgctgaggaatgctttgctgggagtcacggcccccaaaaagggcacg
gaaatggtgaaagtaatgggactgtccaattaccactgtaagctgctgtctcctatattg
acccggtatggcatggataagcaaaccgggaaggccaaactcttgagagcgatgaaccaa
ggggaaatgtttgattgtgccttgttgggtgacagagctttccttattgatgcagagcac
attggaactatgggctatgggaaagaccgctcagggagcctgttgtacctccatgatact
cttgaggagatcaagaaggcaaatagtaatcaagaatgtctaatccctgttcacgttgat
ggtgatggtcattgtttggttcatgctgtttccagggctttggtgggcagagaacttttc
tggcatgctctgcgtgaaaatctcaaacaacactttaagctaaacctggatcgttacaag
gcattatttcatgacttcattgatgcagcagaatgggaggatatcattaatgagtgtgat
cctttgtttgttcctcctgaaggcgtacctttaggtctacgtaatattcatatttttggt
ttggccaatgtattgcatcgtccaatcattttgctagattctctgagtggaatgagaagt
tgtggtgattattcagctacatttctcccaggattagttcctgaagaaaaatgttgggga
aaggatggacagcttaataaacctatttgcattgcatggagcagttcagggcgcaaccat
tatatacctttggttggaattaaaaggggtcctttacccaggcttcctttaaaactgttg
cctaaagcctggggtgttccacaggagcttattaggaagtacatacagtttgacgatgac
agctgtacattaggaggtgaccgaagtttgcaggacaagtacttgcagaggctagttgct
gcgatggaagaaattttcttgaagacacatgatatccacccttctctggtagcagatgtc
catcagtatatatacagaaggacaggggtgattggaatacagcctgaagatgttactgaa
gctgcaaagaaagctgtaattgaaaatcgtttgcaaaaatgtttgatttgtggagctctt
tctgagcttcatgtgcctacagagtggctcgctccaggaggaaagctgtacaacttagct
acaagtactcatggccaactgaagccagacaaaaattacagctttcctgttaaccatttg
gtctgctcatatgatcctaaagaagatgtactggtgccagattataatttgagtcactta
acatcttgcaactggtgtcatggtacttctatgcgccacgtcagaggggatggttctgtt
gtgtacttagatggagatcgaactaatgccagatctgctggaggtaaatgtggctgtggc
tacaagcattactgggaaggaaaggaatatgataacttacccgaagcattcccaataact
ttggaatggaatggaagggtggttcgagaaactgtttattggtttcaatatgaaagtgaa
gtggctctaaacagcaatgtttatgatgttgcaatgaagcttgttaccaagcattttcct
ggtgaatttggaagtgaaatcttgattcagaaggttgttaacaccatattacatcataca
gcaaaaaagaaccctgatgaatatactccagtcactgttgaaggggcacatagtcgtaga
gttggtgacttgcaagatgaaccagcatcagagcctcatttacctaccaaaattatttta
atgggtcagaaatcaaagactctgcataaggaagaactgaatatgagtaaaacggaacga
ggtattcagcagaatattattgaccatgcagctattgtgcaaaagcggaaaactgacaaa
ttacgccaagatcaaaaagtaccaggccaaccatcatctcctggaattattaaagatgga
tcatcatctgctccagccactcccatcaagtccccttattccgcatcacctaccaaggaa
aaaaagattagagtaaccactagtgatgggagacaggcaacactgacccttcaagcatct
gtaacattttcagaatttcaagaaagcatagctaaagaatttaaccttcctccacatttg
caatgtatacggcatggctttcctcccaaggaactgcatccacctaaagtgggatgggaa
aatgaggttttgcccctgcaacatggtgatcgtgtttctgtggagattttgaaagacagc
aaagagcctgtacctgctgcttcaacatctgcagctcattcctggaaaactgaagaacct
gaggcatctggtcgaggttctgttaaggatatgcaagaccatattgatcttgaaatgtct
tccctctgccttctagcaaccttaatgggagaagatgtttggtcatacgcaaagaagttg
ccacacttatttgaacaaggtggggtgttttataacacgatgaagaaagacgtaggtttg
gcagatggcaagcacttcactctcccccatcttcctggtaagacatttgtgtataatgga
acagacgataggctggagctgtgcattgatccagcagggcacatccccattggtcctgac
attgacaatctgatcaaagaggccttgagtcagttacggtctgaaggagggtcaagaagt
agggaaggaagtccttcctcgcacggagggatgaaacttggcagtggaggagtggtgcga
aaaaaatctgaacaaatgccaaatgttacagctttccaaggaaaaggccattccctcgga
actgcttcaagtagcccacagctggagcagaggcatagcagggaaatgcaagtgcccagg
aaacaaagcactggtagttcttcaggagcagatcttagttacggtattggcaggtctagt
cccaaacatggggcttccccacccaagtccagcagtggggatagtcagctaatacgaatg
gcacctggctttgtaacaatgagagatggtaggcaacttgaccccaatttaattgaagca
caacgtaaaaagttgcaggagatggtatcttccattcaagcctccatggataaacacttg
aaggatcaaaatgcagaacaatcagtacctaatgaagtccctgaatcaaaagtacattct
acgacttcctcggttcaattaataatgagaactgaaagccttcatactgatgcactggag
acaccatcaatcactccacaagcaggtgacaatgagaatttgagtatggaaacaacatct
gttggtgtggaactgttatcccatccatccataccatccagcaaggcacagaatggaaac
cttttgaatgaagaccttgaagaaatggatagtcaggaaatagaggggacaattgaacca
atggatcattcttga
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integrated database retrieval system
