Scyliorhinus canicula (smaller spotted catshark): 119972790
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Entry
119972790 CDS
T11175
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5 isoform X1
KO
K18464
WASH complex subunit strumpellin
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119972790 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119972790 (washc5)
Membrane trafficking [BR:
scau04131
]
Protein recycling
Others
WASH complex
119972790 (washc5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
DUF3106
Motif
Other DBs
NCBI-GeneID:
119972790
NCBI-ProteinID:
XP_038666101
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All DBs
Position
10:complement(175879910..175954843)
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AA seq
1160 aa
AA seq
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MVDFLAENNLCGQAILRIVSRGNAIIAELLRLSEFVPSVYRLRDKAEQQKYGDIIFDFSY
FKGPEYYEVKLESKPELQDLDEEFRENHIEILTRFYLAFESVHKYIFDLNRFLDDLNEGV
YIQQTLEAVLLNEDGKQLLCEALYLYGVMLLVIDYKIEGEVRERMLVSYYRYSAARSSSD
SNLDDICKLVRSTGYSPVAGAKRPANYPESYFQRVPISRTFISMVVGRLRSDDIYNQVSA
YPLPEHRSVAFATQAAMLYVILYFEPSILHTQQAKMREIVDKYFPDNWVISIYMGIIVNL
IEAWEPYKAARTALNYTLEQPNIKEQAIRYSTSVDRLRRQVQQFLKEGFLREEYVLDHIP
KLLNCLRDCNVTIRWLMLHTAESVYDPNNKRLRQIKDQVFTDSKYNSKTLFQLLLDSAQF
EFVLKEMFKQMLSEKQAKWESYQKEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQISSLNYEDSTAAGRKTVQLIQALEEVQEFHQLESNLQICQFLADTRKFLHQMIRTINI
KEEVLITMQIIGDLSYAWQLIDSYTTIMQEGIRVSPFMVTKLKATFLKLASALDLPLMRI
NQANSTDLLSVSQYYSGELVAYVRKVLQIIPESMFTSLAKIIKLQTHNIMEVPTRLDKDK
LKDYAQLGSRYEVARLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVRRVAF
ALHKGLIFNPKAKTSELMPKLKEMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNNFLRTKILDWQSMYQSTHIHIPKFQPVDESVTFIGRLCSEILRITDPKMTCYI
DQINTWYDMKTHQEVTNKQLFSEIQNSLGTFGLNGLDRLLCFMIVKELQIFLDMLHRNVL
RDRAVMDTIKPFQLNVNPVKGIIANSSKVYSAAVTKTQKVWSSYQDSILKVGQMQILRQQ
IANELSYSCKFDSKHLAAALENLNRSLLADVEAHYQDPTLPYPKDGNTLLYEITAYMEAA
GIHNPLSKIYVTTKRLPYFPVVNFLFLISQLPKVQYVKNQGMVCKKSTDPTDWPPLVVGL
VTLLKQFHSRYTEHFLALIGQFVRSTVEQCTTSQKIPEMPADAVAALMFLENYIYYAKLS
RKVVEAHVPSFIFDEFRTIL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggtggacttcctggcggagaacaacctctgtggccaggccatcctcaggatcgtgtcc
cgcggtaacgccatcatcgcggaacttttgagactgtccgagttcgtccccagcgtttac
cgactccgggacaaggccgagcaacagaagtatggagacatcatctttgacttcagctac
ttcaagggtccggaatactatgaagtcaagttggagtctaaaccagagcttcaggatcta
gatgaagaatttcgtgaaaatcacattgaaatattgacaagattctaccttgcctttgag
agtgttcacaaatacatatttgatctgaacagattccttgacgatctcaacgaaggtgta
tatattcagcagacccttgaagcagtgctcctcaatgaagatggaaagcaactactttgt
gaagccttatatttgtatggagtcatgctactggttatcgactacaagattgaaggagag
gttagagaaaggatgctggtttcctactatagatacagtgctgctcgttcttcatctgat
tccaacctggatgatatttgcaagctggtgcgtagcacagggtattcacctgtggcaggg
gcaaagagacccgcaaactacccagagagctactttcagcgagtgccaattagcaggaca
ttcatctcgatggtggtcggtcggctgcgatcagatgatatttacaatcaggtgtcagcc
tatcctctgccagaacaccgtagcgtagcctttgctactcaggccgccatgctttatgtc
atcctctactttgaaccatccattcttcatacacagcaagccaagatgagggagatagta
gataaatactttccagacaactgggtgatcagcatttacatggggatcatcgtcaatctc
attgaggcctgggaaccgtacaaagctgccaggacggccctgaattatacactggagcaa
ccaaacatcaaggagcaggcaattcgatacagtacgagtgttgaccgactgcgtcggcag
gtacagcagtttctgaaggaaggcttcctgagggaagagtatgtcctggatcacatccct
aaactattgaactgcctgcgggattgtaatgtgacaattcgctggctgatgcttcacact
gcagaatcggtgtatgatccaaacaacaagcgtttgcgccagattaaagatcaggttttc
accgactcgaaatacaattccaaaacccttttccagctcctgttggacagtgctcagttt
gagtttgttttgaaggagatgtttaagcaaatgctgtcggaaaaacaagccaaatgggaa
agttatcagaaagagggatctgagagaatgactgaactagctgaggtgttctctggagta
aagcccctcaccagagtggaaaaaaacgagaatctgcaggcctggtttcgggagatctcg
aagcagatttcttccttgaattacgaagactctactgcagctgggaggaagacagtgcag
ttaatccaggctttggaagaggtccaagaattccaccagctggaatcaaatttgcagatc
tgccagttcctggcggatactcgcaaatttctccatcaaatgattcgcaccatcaacatt
aaagaggaggtcctcatcaccatgcagattataggggacctgtcgtacgcatggcagctt
attgacagctacacgactatcatgcaggaaggaatccgagtcagccctttcatggtgacc
aaacttaaagcaacatttttgaagttggcatcagctcttgaccttccactcatgcgaata
aatcaagccaatagcactgaccttctgagtgtgtcacagtattattctggagagcttgta
gcctacgttcgaaaggttttgcagattatcccagagagtatgtttacatccttggcaaag
attatcaagctccaaacgcacaacattatggaggttccaactcgactggataaagacaag
ctgaaggactatgcccagcttggttcaagatacgaggttgcaagacttactcatgcaata
tcaatttttactgaaggcattctgatgatgaagactacccttgttggcatcatcaaggtg
gatcctaagcagttgttagaagatgggattcggaaggagttggtcagaagggttgccttc
gctcttcacaagggcctgatctttaacccgaaagctaagacgagtgaactgatgcccaaa
ctgaaggagatggctgccacaatggatggattctaccgttcatttgaatacatacaagat
tacgtcagcatttatgggctgaagatatggcaggaggaggtgtctcgaataatcaattac
aacgtggaacaagagtgcaataacttcttgaggaccaagattctagactggcagagcatg
taccagtccacccacattcacatacccaaattccaaccggtcgacgaatctgtgaccttc
attggacgcctttgtagtgaaatcctcagaatcaccgatcccaaaatgacctgctacatt
gatcagataaacacgtggtacgacatgaagactcatcaagaagtgaccaacaaacagctc
ttctctgaaatccaaaattctttaggtacgtttggactgaacgggctagacaggctgctc
tgcttcatgattgttaaggagctccagattttcctcgatatgcttcatagaaatgtgctg
agggacagggctgtgatggacacgattaaaccatttcagttgaatgtaaacccagtgaaa
ggaatcatagcgaattccagcaaagtgtattctgctgctgtgacgaaaactcagaaggtc
tggtcatcttaccaggattccattctaaaggtgggacagatgcagatattgagacagcaa
attgccaacgaattgagctattcgtgcaagttcgactcgaagcacctcgcagcagctctg
gaaaatctcaaccggtccctgttagctgatgttgaagcgcactatcaggatccaactcta
ccataccctaaagatggtaacacactactttacgaaatcacagcttacatggaggctgct
ggcatccacaaccccctcagtaagatttacgttaccacgaagaggctgccgtattttccc
gtggtgaacttcctgtttttgatttctcagctgccaaaagtgcagtacgtcaagaaccaa
ggaatggtgtgtaaaaaatccacggatcccacagattggccgcctctggtggtgggactg
gtcactctgctcaagcagttccactcgcgttacaccgagcatttcctggccttaatcggc
cagtttgttcgctccaccgtggagcagtgcaccaccagtcagaaaatcccagaaatgcct
gcagatgctgtggctgccttgatgttcttagagaattacatttattacgcaaaattatcc
agaaaggttgtggaagcgcatgtccctagtttcatctttgatgagttcaggacgattcta
tga
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