Scyliorhinus canicula (smaller spotted catshark): 119972809
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Entry
119972809 CDS
T11175
Symbol
tfap2a
Name
(RefSeq) transcription factor AP-2-alpha isoform X1
KO
K09176
transcription factor AP-2 alpha/beta
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119972809 (tfap2a)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Other basic domains
AP-2 (bHSH)
119972809 (tfap2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_AP-2
DUF2624
Motif
Other DBs
NCBI-GeneID:
119972809
NCBI-ProteinID:
XP_038666162
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All DBs
Position
10:complement(179470104..179489112)
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AA seq
490 aa
AA seq
DB search
MSILGKMGDWQDCPLSETSSQPLLHQSMRMLWKLADNIKYEECEVSLFFPPDELRSDCPQ
MLVHSFSAMDRHDGASNGTPRLPQLGTVSQSPYPTAPPLSHTPNTDFQPPYFPPPYQPIY
PQSQDPYSHVNDPYSLNSLHPQPQPQHPTWPQRQNQEAGILHQPRGLPQLAGLDPRREYR
RPEVLLHSAHGLDSGLGDSLPIHSIAHSIEDVQHVDDQGINIQDHTVIKKGPMSLSKSHG
AVTSISLNKDGLFGGVANPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASL
LGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVC
ETEFPAKAIAEYVNRQHSDPSEQVTRKNMLLATKQICKEFTDLLTQDRSPLGNSRPAPIL
EPGIQSCLTHFSLITHGFGSPALCAAITALQNYLTEALKAMDKMYMNSTPNNHTGENSSK
SGDKDEKHRK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatactgggcaaaatgggggactggcaggactgtccgctctctgagacatccagt
cagccacttttgcaccaatccatgagaatgctgtggaaattagcggacaatatcaaatat
gaggagtgtgaggtatctctatttttcccccctgacgagctcagatcagactgcccgcag
atgttagtgcacagtttctcggcgatggaccggcatgatggagcgagcaatgggactcca
cggttgccccagttagggacggtcagccagtcgccatatccgactgccccgccgctgtct
cacacccccaacacggacttccagccgccctactttcctcctccgtaccagcccatctac
ccgcagtcgcaggatccctattcccacgtgaacgacccttactcgctcaactcgctgcac
ccgcagccccagccccagcacccgacctggcctcagaggcagaaccaggaagcgggcatc
ctgcaccagccccgcggtctcccgcagctcgccggcctcgacccgcggagggagtaccgg
cggcccgaggtgctgctccatagcgcccacggactggactcggggctcggggattcattg
cccatccacagcatcgcgcactccatcgaggatgtccagcacgttgacgaccaaggtatt
aacatccaggaccataccgtcattaagaaaggtcccatgtccctgtctaagtctcacggt
gctgtcacctcgatctcactcaacaaggacgggctttttggcggggttgcgaacccaaac
gaggtgttctgttcagttccgggtcgcctctccctcctcagttcaacttcaaagtacaag
gtgacggtggcggaagtacagaggcgcctgtctccgcccgagtgtctcaacgcctcgtta
ttgggaggagtgctcaggagggcgaaatctaaaaatggaggaaggtctttaagagaaaaa
ttagacaaaattggattaaatttaccagctggtagacgtaaagctgctaacgttacgctg
ctaacctcacttgtcgagggtgaagctgtgcaccttgcccgagatttcggttatgtttgc
gagacagaattcccagccaaagccatcgccgagtatgtcaaccgacagcattctgatccc
agtgaacaagtcacacgaaaaaacatgttactcgcaacaaaacaaatctgcaaagagttt
acagacttgctgactcaggatcgatctcctttgggaaattctcggccagccccgattctg
gagcctggcattcagagctgcctcactcacttcagtctcatcacacacggcttcgggagc
ccggctctgtgcgctgccatcaccgccttgcagaactatctcacggaagcactcaaagcc
atggacaaaatgtacatgaacagtactcccaacaaccacacgggcgaaaactccagtaaa
agcggggacaaggacgagaaacacagaaagtga
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