Scyliorhinus canicula (smaller spotted catshark): 119972813
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Entry
119972813 CDS
T11175
Symbol
ctdp1
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scau01009
]
119972813 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scau03021
]
119972813 (ctdp1)
Enzymes [BR:
scau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
119972813 (ctdp1)
Protein phosphatases and associated proteins [BR:
scau01009
]
HAD phosphatases
Fcp/Scp phosphatases
119972813 (ctdp1)
Transcription machinery [BR:
scau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119972813 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
PTCB-BRCT
RTT107_BRCT_5
Biotin_lipoyl
Motif
Other DBs
NCBI-GeneID:
119972813
NCBI-ProteinID:
XP_038666174
LinkDB
All DBs
Position
10:complement(179777370..180065710)
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AA seq
1027 aa
AA seq
DB search
MAALAEAGEPDRDQDQEQNRDGPVAAAVARAVLEVAAPGSRPLRLLEWSVRVGWPVQIGT
VLAHCLPVEQESGAERERPRPRPQEKRVKSDRAGVVKELCWQPGQVVPSGSVLVRLEGCS
HPIVMKGLCAACGQDLTQLQKKNGKQMVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQ
WLHKNRKLVLMVDLDQTLIHTTEQLCQKMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEK
IAKLYELHVFTFGSRLYAHKIAGLLDPEKKLFSHRILSRDECIDPYSKTGNLRNLFPCGD
SMVCIIDDREDVWKFAPNLIAVKKYIYFQGTGDINAPPGSREAQMKKRVNHSSKPAEEAE
QPASTSTDSAGAIDRCGEVSEAKEQSNGLGECSKKQNGSTGVLSEEASKCAESLKCGPNT
KDSQDTANERKPLCDATVSHTKTAIADTPVKVGESEHSLEGVVTATESSSEPRSREAESQ
LAQAGGELDFDLSSDSDSEPQEGKRDTASPSPTSSLDAEKEPRGLPGKKSRKQRKAGPGQ
AEAKLNHSDKGKEKAGDLPESESQDKCPDQAPEGDDDQDSLGDVGNGCADKKEAETESQN
SEQSGVTMGESLDQSMDVEEEDPDEDDHLMYLETILVHVHTEYFAQYEKYLKKERDVPDL
KQIVPELKSKALQGTIIIFSGLYPTNYPIEKTREWYHATALGAKVKKTLCLNPKDPSRTT
HLIAARPGTEKVRQALACKHLHVVNPDWLWSSLERWERVDEKLFPLKEDYIKTQRTNSPA
GFPEVHGGLQTPLFHPTPIHPKAQPGPEVRIYDPNTGKLIRKDSHGNRQSVCIQPPAPPV
TLSVHGEQSSFRVVQPHQQPILEDDELPNSSQSEEKPGPSRAGARKRQPSMSETMPLYTL
CKEDLESMDKEVDDILGEDSDNESESEKEEKMEAQQREQPPEETQQPDQLAMQSGATRNL
KPDIETRPKSSSSEESLTGRVPRGHKRKLEDDGAGSDSSKLSSNEDDSSSEADEMAAALE
AELNDFI
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttggcggaggcgggggagccggaccgggaccaagaccaggagcagaaccgg
gatggcccggtggccgccgcggtagcccgggccgtgctggaagtggcggccccgggctcc
cggcctctgcgcctgctggaatggagcgtgagggtgggctggccggtgcagatcggcacg
gtgctggctcactgcctccccgtggagcaagagagcggcgccgagcgcgaaaggccccgg
cctcggccgcaggagaagcgggtgaagtcggaccgggccggggtggtcaaggagctgtgc
tggcagccgggccaagtggtgcccagcggaagtgtattggtacgcctggagggatgcagt
caccccattgtaatgaaaggtctctgtgcggcctgtggtcaggacttgacgcaattacag
aagaagaatgggaagcagatggtgccactatccacagccactgtttccatggtgcacagt
gttccagagctgatggtcagctcggagcaagcggaacagctgggtcgagaggatcagcag
tggttacataaaaacagaaaattggttttgatggtggatctggaccagactttaatccac
acgacggaacagctgtgccaaaagatgtccaataagggaatattccatttccagctggga
cggggagagccaatgttacacactcggctacgacctcactgtaaagagtttctcgaaaaa
atagcgaaactttacgagctgcatgttttcaccttcggcagcaggctctacgcgcacaaa
attgcaggacttctggatccagagaagaaactattctcgcatcggattttatctcgggat
gagtgcatcgatccatattctaaaactggaaacctacgaaacctctttccgtgtggggac
tcaatggtttgcatcattgacgatcgcgaagacgtttggaagtttgcaccgaatctaata
gcggtgaaaaaatacatctactttcaaggcaccggggatatcaacgccccaccaggatcg
agggaggctcagatgaagaaaagggtaaaccattcgtcaaagcccgcagaggaggcggaa
cagccagcgtccacttccaccgacagtgccggcgcaatcgacagatgtggcgaagtgtcc
gaggcaaaggaacagagtaatggccttggggagtgttcgaagaagcaaaacggcagcact
ggcgttctaagtgaggaagcttcgaaatgtgctgaatctttaaaatgcggccccaacacg
aaggattcacaggacacagcaaatgagaggaaacctttatgcgatgccacggtttctcac
actaaaactgctattgctgacactcctgtcaaagtgggcgagtcagaacactcgctggag
ggcgttgtcacggcgacggaaagtagctcggaacctcgcagcagggaagcggaaagccag
ttggcccaggctggcggcgagctcgattttgacttgtcgagcgacagcgacagcgagccg
caggagggaaagagggacaccgcctcgccctcgcctacctcgagcttagacgccgagaag
gagcccaggggcttgcccgggaagaagtcaaggaaacaaaggaaagcaggacccgggcag
gcggaagcaaagcttaaccactcggacaaggggaaggaaaaggcgggggacttaccggag
tccgagtcgcaggataaatgccccgaccaggcacccgagggggatgacgatcaggactcg
ctcggcgatgtcgggaacgggtgcgcagataagaaggaggcggaaaccgagtctcaaaat
agcgaacagtcgggagtgacaatgggcgagtccctggaccagagcatggacgtggaagag
gaggatccagatgaggacgaccatctgatgtacctggaaaccattctggtccatgtccac
accgagtattttgcccagtatgagaaataccttaaaaaggagagagatgtgcctgatctg
aaacagatcgttccggagctgaagagcaaggcgctccaaggcacaataataatattcagt
ggactctaccccacaaactacccaatagaaaagacgagagagtggtaccatgccacagca
cttggagccaaggtgaagaaaaccttatgtttaaatcccaaagacccctccaggacaact
cacttaattgcagctcgacctgggacggagaaggtccggcaagcgctagcgtgcaaacat
ctccatgtggtaaaccccgactggttatggagctcgctggaacggtgggaaagagtcgat
gaaaagttattcccgttgaaagaagattacatcaaaactcaaagaaccaacagccctgcc
ggcttcccggaagtccacggtggtttgcaaacaccattgtttcatccgactcccatccac
ccgaaggcacagcccggacctgaggtccgcatttacgatcccaacacaggaaagctcatc
cggaaagattctcatggaaacaggcaatccgtgtgtatccaacctccagctcccccagtt
acgttatccgttcatggagaacagtcgtcattcagagttgtacagcctcaccagcagccg
atattagaagacgatgagctgcctaactccagccagagcgaagagaagcctggcccctcg
cgggctggagctcggaaacgtcagccgagcatgtctgaaacgatgcccctctacacactc
tgcaaggaggacctggagagcatggataaagaggtggacgacatcctgggcgaagatagc
gacaatgaaagtgagagcgaaaaggaagagaagatggaagcgcagcagcgtgagcagccc
ccggaggaaacacagcaaccggatcaactggcgatgcaaagtggagcgaccagaaatctg
aaacctgacatagaaacaagacctaaatcatcctcgagtgaagaaagcttaacgggcaga
gttcccagggggcacaagcggaagttggaagatgacggtgcgggcagcgactccagcaag
ctctccagcaacgaggacgacagcagttcggaggccgacgagatggcagcagctctggag
gccgagctgaacgatttcatttga
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