Scyliorhinus canicula (smaller spotted catshark): 119972814
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Entry
119972814 CDS
T11175
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04020
Calcium signaling pathway
scau04148
Efferocytosis
scau04218
Cellular senescence
scau04310
Wnt signaling pathway
scau04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119972814 (nfatc1)
04310 Wnt signaling pathway
119972814 (nfatc1)
04020 Calcium signaling pathway
119972814 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119972814 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
119972814 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119972814 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119972814 (nfatc1)
Transcription factors [BR:
scau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
119972814 (nfatc1)
SSDB
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Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
119972814
NCBI-ProteinID:
XP_038666175
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Position
10:complement(180178806..180459428)
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AA seq
939 aa
AA seq
DB search
MKSAEEEAYSFASPHVTVTPSTGLLNPSIPISCHGLQSSCPVASVLPPTNQMMGYGANID
TGASNYYLTPNVRPNGAPTLESPRIEITSYPGIHIGHNQFAGETEVDGIENGSGCKRSNS
LVTLTLPNADVYRDPSCLSPASSLSSRSCHSEASESSYSIPYDTSPLTSPWQSPCVSPKG
TAHEEGFPRGQAACTLWNSPGHSPGPSPRTSITEENWLSPRPTSRPSSRPPSPCGKRRHS
FNGGYYRQPSYSPHHSRTPSPQASPRVSVTEETWSGSGNQYNSAILAAITALTTDTGMDI
NDSIPVKSPRRTIQDQNPSMSFKPEPGNDEQITYSPSGDPLQEEFSASRLLIKKETFCEQ
YLSVPQHPYPWAKPKSVSSSSSSFASPSLPALDWQLPFHSGPYELEVEVQPKSHHRAHYE
TEGSRGAVKASGGGHPIVQLHGYMESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVS
TNSHESIINNTKVLEIPLLPENNMRANIDCAGILKLRNSDIELRKGETDIGRKNTRVRLV
FRVHIPQPNGRTVSLQASSNPIECSQRSAQELPLIEKQSVDRYPVIGGKMMILNGHNFLA
ESKVIFVEKAADGHHVWETEAKTDKEFFKPNSLIVEIPPYRNQRITSPVQVYFYVCNGKR
KRSQSQRFSYLPANVPVIKTEPTDDYEPTLVYGSLNQGMNPVSQSYYAQQVMTPEMTPDP
GPCLVNSFPSCQQRNAGLSSSPTSSHKPHEIAPVSYAKCVSSPASTQLSHQQPGLTATTI
QEAHRSIAVHPSSPTHSARVMMQPQMGQHLNSSCSHGFQQTLYPNSLSPQGPVASPEAAY
VSPPFSPAGSAALGQQQQFQKPPRNGSQSSQSMMSPVHQEDSQDLTPLQVTVKQEPQELD
QLYLDDGDRNIKITCFSSSLAVNEIIRNDLSSASVHGHS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgcagaggaagaagcctacagttttgcttcaccacacgttacagtcactcca
tctacaggcctgctgaatccatccataccaatatcctgtcatgggctgcagtcttcctgt
ccagtggcgtctgtgctaccaccaacaaatcaaatgatgggatatggggcaaacattgac
actggagcttcaaactactacttgactcctaatgtaagaccaaatggtgctccaactctt
gagagtccaaggatagaaattacttcttatccaggaatacatattggccataatcagttt
gctggtgaaactgaagtggacggaattgagaatggttctggctgcaagcgctccaattca
ctagttaccctgactctaccaaatgcagatgtctaccgagatccctcgtgcttaagccca
gcaagcagcctttcttctcgaagttgccattctgaagcatctgagtccagttactccatc
ccgtatgatacctctccactgacctctccttggcagtcaccatgcgtctcacccaagggc
actgcccacgaggaaggattccctcgtgggcaagctgcatgcaccctttggaattcaccg
ggacactcaccaggcccttcaccgagaacaagtatcaccgaggagaactggttaagtcca
cgaccaacctcgaggccatcgtcgaggccgccatctccctgtggcaagagaaggcattcg
ttcaacggtggatactaccgccagccatcctattcaccacaccattctcgaaccccatca
ccgcaagcttcccctcgggtaagcgtaaccgaggaaacctggtcggggagtggaaaccag
tacaattctgctatccttgctgccattacagcgctcaccactgacacaggtatggatatc
aatgacagtattcctgtcaagtccccaagaagaactatacaagaccaaaacccttctatg
tctttcaagcctgaaccagggaatgatgaacaaataacttattcaccatctggagatcca
ctgcaggaagaattttctgcatctcgccttcttatcaaaaaagaaactttctgtgaacag
tatttatcagtacctcagcatccatatccatgggctaaaccaaaatctgtgtcatcatca
tcatcatcctttgccagcccttctttgcctgccctcgactggcagttgccgttccattca
ggaccgtatgagcttgaggttgaggtgcaaccaaaatcacatcacagagcacattatgag
acagaagggagtcgaggagctgtaaaggcatctggtgggggacaccctattgtgcagctc
catggctacatggaaagcgaacctctcactctccagctgttcattgggacagcagacgat
cgcctgctgcgaccacatgccttctaccaggtccatcgaatcaccgggaagaccgtttcc
accaacagccacgagagcatcatcaacaacaccaaggtgctggagattcccctgctgccg
gaaaacaacatgcgcgcaaatattgattgtgctgggatactcaaacttaggaattctgat
attgagctgagaaaaggcgagacggacattgggaggaagaatacaagagtgaggctggtc
tttcgtgtacatattccacaacccaacggtagaactgtctctctgcaggcttcatcgaac
cctattgagtgctcccaaagatccgcacaagagttgccactgattgaaaagcaaagcgtt
gatagatatcccgtgatcggtgggaagatgatgattttaaacggtcacaacttcctcgca
gagtcaaaggtcatctttgtggaaaaggcagcagatgggcatcatgtgtgggagactgaa
gcaaaaactgacaaggaattctttaagcctaattcactcatagttgaaattccgccctat
cgcaaccaacgcattaccagccctgttcaagtttatttctatgtctgcaatgggaaacgg
aagaggagtcaaagtcaacgcttctcctatctacctgctaatgttcctgttataaaaaca
gaacccaccgatgactacgagcccacattggtctacgggtcgcttaatcaagggatgaac
ccagtgtcccagtcctactacgcccaacaggtcatgacacccgagatgacaccggatcct
ggcccctgccttgtcaacagctttccctcttgccagcaacgaaacgctgggttatcgtct
tcccctacgtcaagtcacaagccgcacgagatcgcacccgtgtcttacgccaaatgcgtc
agcagcccagccagcacccagctcagccaccagcagcccgggctgacagcgaccaccatc
caggaagcccaccgatccatcgccgtgcatccaagctcacccactcattcagcacgcgtg
atgatgcagccccagatgggtcagcatctgaacagcagctgttcccatggcttccagcaa
actctgtatcccaacagtctttctcctcaagggccagtcgcttcccctgaggccgcctac
gtgtcgccgcccttcagcccggcgggctctgcagccctgggtcagcagcagcagtttcag
aagcctccaagaaatggatcccaatcaagtcaatcaatgatgtcaccggtgcaccaagaa
gacagtcaggatttgactcccttgcaagttacagtgaagcaggagccgcaggaactggac
caactgtaccttgatgatggtgatcgaaatataaaaatcacatgcttcagcagcagcctg
gctgtaaatgaaatcatacgaaatgacctctcaagtgcctctgttcatggacattcatag
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