Scyliorhinus canicula (smaller spotted catshark): 119972896
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Entry
119972896 CDS
T11175
Name
(RefSeq) mitochondrial potassium channel ATP-binding subunit-like
KO
K05655
ATP-binding cassette, subfamily B (MDR/TAP), member 8
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119972896
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119972896
Transporters [BR:
scau02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
119972896
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_16
AAA_22
DUF87
APS_kinase
AAA
Sigma54_activat
AAA_25
AAA_24
RsgA_GTPase
AAA_29
AAA_5
ABC_ATPase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
119972896
NCBI-ProteinID:
XP_038666369
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Position
10:2738719..2829741
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AA seq
688 aa
AA seq
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MFHLCLRSGAKARGLFPIRTVYPRSRAGGWIAADSSRHCLSWGQRCWRHPRGMKVSECSF
FLQLLNESGNSIRQRVCGWLQGPVRTRSAFLLVATPGLITLCLRLHNNIAHCEEGQRCKV
QKSKQPAPEFNWKEFWRFLQPELTALIWAVIFACGAALLNTQIPLFLGDLMNAVVQCLRT
NPACYFRAMKAPCVKLLVTYTLQGVLTCFYITLLSRVGERVAASIRKELFATLLRQDVAF
FDATRTGHLVSRLTNDIQEFKSSFKLVVSQGLRSATQTIGCLVSLYFVSPKLTNLMCVVM
PVLVGIGAYLGSYLRELSQKAQEQISKATCVADEALGNVRTVKAFAMEDLEIEFFSKEVD
KSSNMSELLGFGIGIFQGLSNFTLNFNFELQKKQTSVPEAEENSFIIRGMTSGSRVFEFM
TLEPTIPVKGGFQIPVHALAGMVQFHNIIFSYPTRPGHVVLHNLNLTLPASKTVAIVGQS
GTGKSTVASLMERFYDPDSGVITLDGYNIRTLDPHWLRSHVIGYISQEPVLFGTTIKENI
QFGKPDASDEEIYEAARQANADSFIQTFPNGYMTIVGERGVTLSGGQKQRIAIARALIKN
PCILILDEATSALDAESERVVQDALDQIQKGRTVLVIAHRLSTIRAADVICVLANGHVKE
VGTHAELLKRGGLYAELVRRQTSEEFIV
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacctgtgtttgaggagcggtgcgaaggcccggggacttttccccatccgcacc
gtgtatccccggtcccgagccggcggctggatcgccgccgacagcagcaggcactgtctg
agctggggccagcgatgttggagacatcctcgaggtatgaaggtttccgaatgcagtttc
ttcttacagttgttgaatgagtcaggaaacagcatcaggcagcgagtgtgtggctggctg
cagggcccagtgaggactcgtagtgccttcctgttggtggccacgcctgggctaataaca
ctgtgtctgaggctccacaacaacatcgctcactgtgaagagggccaaaggtgtaaagtt
caaaaatccaagcagcctgcccctgaatttaactggaaggagttttggaggtttctacag
cccgaactcactgcattgatttgggcagtaatctttgcctgtggcgcagcactactgaat
actcagatcccactattcctgggagacctgatgaacgctgttgtccagtgcctgcggacg
aacccagcctgctacttcagggccatgaaggcaccatgtgtaaaactgctggttacctac
acgctgcagggtgtcctgacttgtttttacatcactctcctgtccagagtcggcgagcga
gttgctgccagcataaggaaagaattgtttgccaccctgctgaggcaggacgtggccttt
ttcgatgccactcggacaggccatctggtgagccgcttaacaaacgacatccaggaattc
aaatcctctttcaagctggtagtgtctcagggcctgaggagtgcaacacagacaatcggc
tgcctggtgtctctttactttgtttcgccaaagctaactaatctgatgtgtgtggtaatg
ccagtgctggttggaatcggagcctatttgggctcataccttcgggaactatcccaaaag
gcacaggagcagatttccaaggcaacatgtgtggcagatgaggcactgggaaacgtacgg
acagtgaaggcatttgcaatggaagacctggaaattgagtttttctcaaaggaggtggat
aaatccagcaacatgagcgagttgctggggttcggaatcggcatcttccagggattatct
aactttacgttgaactttaattttgaattgcagaaaaagcaaacaagtgttcctgaggca
gaggaaaactcttttattatccgcgggatgacctctggaagccgagtgtttgagttcatg
acgctggaaccgacaatcccagtgaaaggtggcttccagatcccagtgcacgccctagct
gggatggtgcagttccacaatattattttcagctaccccaccagacctggtcatgtggtg
ctgcacaacctcaatctcacattgccagcctcaaaaacagtagctattgtgggacaatct
gggacaggcaagtcgacagtcgcatctttgatggaaaggttctatgacccagacagcgga
gttatcacattggatggatacaacatcaggaccctggatccacattggttgcgcagtcac
gttattggttacattagccaggaaccagtgctttttggcaccaccatcaaggagaatatt
caatttggaaagccagatgcctcggatgaggagatttacgaggcagcacggcaggcaaat
gcagacagcttcatccaaacctttccgaatggatacatgaccattgtgggtgaacggggc
gtgactctctctgggggacagaagcagcgtatcgccatcgcccgtgccctgattaaaaat
ccctgcatcctgatcctggatgaggctacaagtgcgctggatgcagaatcggagagagtt
gtacaggatgcactagaccaaatccagaaaggacggacggtgctggtcattgcacacagg
ctcagtacaatcagggcagctgatgtcatctgtgtcctcgctaatggccacgtaaaggag
gtggggacccatgctgaactgctgaaaagaggaggactgtacgcagaactggttcgcaga
caaactagcgaggagttcatcgtgtga
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