Scyliorhinus canicula (smaller spotted catshark): 119972903
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Entry
119972903 CDS
T11175
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04382
Cornified envelope formation
scau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119972903
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119972903
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119972903
Cell adhesion molecules [BR:
scau04515
]
Cadherins
Major cadherins
119972903
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Urm1
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
119972903
NCBI-ProteinID:
XP_038666377
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All DBs
Position
10:9492332..9528194
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AA seq
1055 aa
AA seq
DB search
MAQPGIIFITFIPGTFVLKVNATDADKDENAVIAYKIISRNSQHLFNARSTGEIQIFGRN
LDRETQDLYTLIVQGCDLNGNVGGKCSKANAQIRILDVNDNIPTTEKEEYEVSVEENSLN
DEVTRIKIFDKDEKFTDNWIGNFDIVEGNEGGHFRFDVDEKTNEGILVLQKELDYEMVQT
KNLVFRVANKAQYHSSVHAGGGGGGGGGGGGGGGGGGSVMVKPITIKVNVKDQKEGFSFK
PTTKRLSMTEDTTRVKIGHSFGTYPAISADTGKESERTRYAKNSDPANYFNINPETGEIT
LNKLPDRESEYVVDGKYTTTMLAIDNDGPVPKTATGTIVFDVDDTNDNIPLIVNLKPCMC
EEATSLTITANDADSYPNAGPYHFKLVDQPGVTDKWKILRRDDTSAVLQPIAKLWPHTFK
VPIRVDDNQGLGKVQNVEVNVKECVKNEVPCSPENMRQTDARGAGLGASAIGLMVLGALL
LLLAPLLLLFCNCGGAGAGKGGFDGRMNPIPPASIGKLGVDGPESGGQAAPLLPPAIGSR
IPPGFVDSHDGGSRHGQGVITRGSTGGTFGRRTINSQSEIITQEVTGTQTQPPRSNMGQG
HIVQNNHQMSGWGGKTISGSSFKEYVDSYMNEKLIECSEEDQTRPARECLLVYNYEGEGS
PVGSLGSCSFIADEFQFKDSDLDDLSPKFKMLANICTGKFEGQTSAISFNPPVQQTVTNT
ERSFSSTSTGLGIIADQLPMQKNYVVTTTINPVAEVLPSFVDPPMAYQNVAVSKQVHTSP
VGMSTMVIDSPMAYQNVAVSKQVHTSPVGMPTMIIDPPMAYQNVAVSKQVHTSPVGMPTM
VIDSPMVRQNVTTTKQVYAGPVGMPTMIIDPLMAHQNVTTTKQVYAGPVGMPTMVIDPLM
AHQNVTTTKQVYASPVGMPTMIIDPLMANPSLAHRNVTTTKSVNVSLGGTQAVVADPSLP
QLPIVHKNVTLNRATHSGTGATQNMIVNSPFDQTPAIHKNVTLTRPAHAAGGGGHGGNSA
TASLVQKSSVTRRSVTSADDANKTVTKVTKVTQVM
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcctggtataattttcataacttttattccaggcacctttgtgttgaaagta
aatgcaactgatgcagataaagatgaaaatgcagtcattgcctacaaaattatatcgagg
aactcccaacatttgtttaatgcaaggtccactggagaaatccaaatattcggaagaaat
ttagacagagagacccaggatctgtacaccttaattgtgcaaggttgtgatttaaacggg
aacgtcggagggaaatgttccaaggccaatgcacagatcaggatcttggatgttaatgac
aacattcccacaacggaaaaagaggagtatgaagtctctgtggaagaaaattcactgaat
gatgaggtcactcgcatcaaaatatttgacaaagatgaaaaattcaccgataactggatc
gggaactttgatatcgttgaaggaaatgaaggaggacactttaggtttgacgtggatgag
aagaccaatgaagggatactggttcttcaaaaggaactggattatgaaatggtacaaacc
aagaatctggtttttcgtgtcgccaataaagctcagtatcactcatcagttcacgctgga
ggaggaggaggaggaggaggaggaggtggaggaggtggaggaggtggaggaagcgttatg
gttaaaccaatcacaataaaagtcaacgtgaaagatcagaaagaaggcttttcatttaaa
ccaaccacaaagcgactcagtatgactgaggatacaacaagagtcaaaattggtcactca
tttggaacatatccagccatcagtgcagatactggaaaagaaagtgaaaggaccagatat
gcaaagaattcagatccggcaaactacttcaacattaatcctgaaacaggggaaatcacc
ctgaacaaattgcccgaccgagagtccgaatatgttgttgatggaaagtacacaacaaca
atgttggctatagacaacgatggaccggttcccaaaacagccacgggcaccatcgttttt
gatgtggacgatacgaatgataatattccactcatcgtcaatctgaagccttgcatgtgc
gaggaagcaacgtccttgaccatcacagccaacgacgcagattcgtaccccaacgcaggc
ccttatcacttcaaactcgtggatcagccaggcgttaccgacaagtggaagatcttacgt
agagatgatacgagtgcggtgcttcagccaatagcaaagctgtggccacataccttcaag
gttccaataagggtggacgataatcaggggttgggaaaagtacaaaacgtggaagtgaat
gtgaaagagtgtgtcaaaaatgaagtgccctgctctccagaaaacatgcggcagacggat
gcaagaggggctggccttggtgcctctgccattggccttatggtacttggagcgttgtta
ctccttttggctcctctcttgttactgttctgcaactgtggtggtgctggagctggaaaa
ggaggttttgatggaaggatgaatccgatcccccctgcatctatagggaaactgggtgtc
gatggcccagaaagcggtggacaggcggcccccttgcttccacctgcaattggaagtaga
ataccacctggttttgttgattctcacgatggtggcagtagacacggacaaggtgtaatc
acaagaggcagcacaggaggaacatttggtcgacgcacaataaattcacagtctgagatt
ataactcaagaagtgacggggacacaaactcaacctcccaggagcaacatgggccaagga
catattgtgcaaaacaatcaccaaatgtccggttggggcggaaaaacaatttcaggcagc
agctttaaagaatatgtggactcgtacatgaatgagaaattgatcgagtgctccgaggaa
gatcagactcgccctgcccgcgaatgcctgctggtctataattacgagggtgaaggatcg
cctgtgggctccctgggcagctgcagctttatcgcggatgaattccagtttaaagattcc
gacttggatgatttaagcccaaagttcaagatgttggctaacatctgcactggcaaattt
gagggtcaaacctccgcgatcagcttcaaccctccagttcagcaaaccgttacgaacacg
gagagatccttttcatctacttcaacaggattgggcatcatcgctgaccaattgccgatg
cagaagaattatgttgtgaccacaacaataaatcctgtggctgaggtgttgcctagcttt
gtggatcccccaatggcgtatcaaaatgttgcggtgagcaagcaagttcacacaagcccg
gtaggaatgtcaacaatggtcattgactccccaatggcataccaaaatgttgcggtgagc
aagcaagttcacaccagcccagtaggaatgccaacaatgatcattgaccccccaatggca
taccaaaatgttgcggtgagcaagcaagttcacaccagcccggtaggaatgccaacaatg
gtcattgactccccaatggtgcgccaaaatgttacgacgaccaaacaagtttatgccggc
ccagtaggaatgccaacaatgatcattgatcccctaatggctcaccaaaatgttacgacg
accaaacaagtttatgccggcccagtaggaatgccaacaatggtcattgatcccctaatg
gctcaccaaaatgttacgacgaccaagcaagtttatgccagcccagtaggaatgccaaca
atgatcattgaccccctaatggcaaatccgtcactcgcccaccgaaacgttacaacgacc
aagtcagttaacgtcagtttgggagggacacaggccgtggttgctgacccgtcgcttccc
cagctgcccattgtccacaagaacgtgacactaaaccgggcgacccattccggcacggga
gcgacgcaaaacatgatcgtcaattcacccttcgaccaaacacctgccatccacaagaat
gttactctcaccaggccagctcatgctgccgggggaggggggcacggcggcaattcggct
acggcttcgctggtccagaaaagcagcgttacccgcaggtctgtcacatccgctgatgat
gcgaataaaacagtaacaaaagtaactaaagttacgcaggtgatgtag
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