Scyliorhinus canicula (smaller spotted catshark): 119972904
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Entry
119972904 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: desmoglein-2-like
KO
K07597
desmoglein 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04382
Cornified envelope formation
scau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119972904
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119972904
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119972904
Cell adhesion molecules [BR:
scau04515
]
Cadherins
Major cadherins
119972904
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GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
RibLong
Fibulin_C
TBPIP_N
Motif
Other DBs
NCBI-GeneID:
119972904
NCBI-ProteinID:
XP_038666378
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Position
10:9536844..9610248
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AA seq
781 aa
AA seq
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MWSGTVGAALSLLLLTYSEVVQCTCKRGFSQRNVEAEIAPHVSKGQVILTVDFHDCGQGR
NIRLGTNDNGFEVDAAGVVRAARSRAFDSRHRFAVRADDLDAGEWWTVDARLTIRKKAEL
VKRSLEVIRFPQKGSSRRQKREWIIPPLDIVENEKPNNPIAEILSDVQESSDVKVTYVIT
GKGANEPPIGLFVIDPYTGKLNVTAVVDREEYSVFKLVGQAYDQNGRPKEKAIELIIRVL
DVNDNPPIFTQSVYEGSVEELSPFGTTALQLNATDADTGLNALISYRVLSQGTKERFYAT
LNGQLKVTDSNLDRETQDSYKFLIEARDLNGDVQGLTATATAQIRILDVNDNIPSAEQLE
YTAKVKENVRDFEALRIKVTDKDLEFSDNWLAHFDIVEGNEDNQFRFEVDNRTNEGILIV
QKELDYEQMDLVNLIVRISNKAPFHSSVPQDYNAKLIRIKVSVLDEVEGFLFKPSKWLVS
VRESTTSKTVRQVFGRYHAVSADTGKPSKMTKYAKDSDEANWLVINPETGEVTFVGVPDR
ESKYVINGTYTATVLAITDERNQVSTSTGTIVLSVQDANDNSPNXENSHPCLCSNSKSLN
LTAFDPDGHPYGAPFSFKVNSNKKWKLGRTDATSMELIPLIDLWPGTFTVPISVKDYDGN
GHLENLNVRVTDCHDTTMCSAEKLFQSNNAFLGGGAIGLMILALLLLLLVPLLLLLCHCG
GGIGGKGGFLAIPVEPKGSLGNGNFEGGGRVDTVCISITSAVIFHCGFWSVTSYKASSGT
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcgggacggtgggagctgccctgagcctcctgctgctgacatactctgaggtc
gtgcaatgtacttgcaaaagaggattttcccaacgcaatgttgaggcggagattgctcca
cacgtttccaaagggcaagttattcttactgtggatttccatgactgtggccaggggagg
aacatccggttgggaaccaatgataacggctttgaagtggatgctgctggagttgttcgt
gccgctcggtctcgggcctttgattcgcggcacaggttcgccgtgcgggcggacgatttg
gacgctggtgaatggtggacagtggatgcccggttaaccatccggaaaaaggctgagctt
gtgaaaaggagccttgaagtcattcgtttcccacaaaaaggaagctccaggcggcagaag
agagagtggatcattccaccacttgacattgtggaaaatgagaagccaaacaatccaatt
gctgaaattttatcagacgtacaggaatcatccgatgttaaggttacctacgtgatcacc
ggaaagggggccaatgaaccacctattggtctgtttgtaattgatccatacactggtaaa
ttaaacgttaccgcagtggtggatcgtgaagaatattcggtgttcaaacttgtcggtcaa
gcctatgaccagaatgggagaccgaaggaaaaggcaatcgagcttatcattagggtttta
gatgtaaatgataatcccccaattttcacacaatcagtctatgaagggagtgtcgaagag
ttgagtccatttggcaccactgcattgcaactaaacgcaactgacgcagatacaggatta
aacgctcttattagctacagggtcttatcacaaggtactaaggaaaggttttatgcaaca
ttgaatggccaactcaaagtcacagattctaatctcgaccgggagacccaggattcctat
aaattccttattgaagctcgggacttgaatggagatgttcaaggattaactgcgacagca
acagcccagatcaggatcttggatgttaatgacaacatccccagcgctgaacaattggag
tacacagcgaaggtgaaagaaaatgtgagagattttgaagctctgcgcattaaggtgacg
gataaggatctggagttcagcgataactggttggcgcactttgatattgtcgaaggcaat
gaagacaaccagttcaggtttgaagtggacaaccgaacaaacgaaggaattctgattgtt
cagaaggaactggactatgaacaaatggacctggtgaatttgattgtgcggatctctaac
aaggcgccgttccacagctccgtacctcaggactacaatgccaagctcattcgaataaaa
gtcagcgtattggacgaggtagaaggtttcctgtttaagccctcaaaatggctggtctcg
gtccgtgaaagcacgaccagcaaaacggtgcgtcaagtgtttggaaggtaccatgcggtt
agtgccgacactgggaagccgagtaagatgaccaagtacgcaaaggattctgatgaagct
aactggttagttataaaccccgaaactggggaggttacttttgtcggtgttcctgaccga
gagtccaaatatgtgattaatggaacgtacacggcaacagtattagccattaccgatgaa
cgtaatcaagtctcaacttcgaccggaaccattgttcttagtgtgcaggatgccaatgat
aattccccaaatnntgagaattcacacccatgcctatgcagcaactcaaaatccttgaac
ctcactgcttttgatccagacgggcatccatacggagcccctttcagttttaaagtgaac
tccaacaagaagtggaaattaggacgtactgatgcaaccagcatggagctgattcctttg
atagatttgtggcccggaacctttaccgtgccaatatctgtcaaagactatgacggcaat
ggacatctggaaaaccttaacgttcgagtcaccgattgccacgataccaccatgtgctcg
gcagagaaattatttcagtcaaataacgctttcctcggtggcggtgctatcggcctcatg
attctggcgttactgctgctactacttgttccgttgctgctgctgctttgccattgtggg
ggcggaattggcggcaaaggcggctttttagcgatacctgttgaaccgaagggatcccta
ggaaatggcaactttgaaggtggagggcgggttgacacggtttgtatctccatcacttca
gctgtgatctttcactgtgggttttggtcagtcacgtcttacaaagcctcctccggtact
gggtga
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