Scyliorhinus canicula (smaller spotted catshark): 119973111
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Entry
119973111 CDS
T11175
Symbol
shq1
Name
(RefSeq) LOW QUALITY PROTEIN: protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scau03009
]
119973111 (shq1)
Ribosome biogenesis [BR:
scau03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
119973111 (shq1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
DUF4123
Motif
Other DBs
NCBI-GeneID:
119973111
NCBI-ProteinID:
XP_038666601
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All DBs
Position
11:complement(62773968..62858257)
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AA seq
623 aa
AA seq
DB search
MITPAFELSQEPNFLTIIIHVPYAKVNEVDLYIDGVDFKFYAKPYFLRLTLPGRIVEDGR
EKASYDADTGTLTIKVPKETPDEYFEGLNMLTALLAPKGSRSAKPLLEEIGPSINAEEEE
EEFDWEIEQSPFVHLEGNVINSSCFYGFANLRSGVFERLQHELSDVIDLKEPDHTTMVER
RQKRLAAEETKFDSDHYLADLFEDDAIQHLLTYGPWWANTREAKKVKKTQNEQHLMDPGS
QFVKFSKDEKEQLRNFTNKSYLLDRRSCQNVYLGLLDILLAYAYEVRSTEGEANTESSWN
IWKLSGTLCWLETYHSLQEVLVSFSRRVLCYPFYRHFQLALKAVEDAVLILQLGKSAVLK
CLLGIHQIFRESDPAYLLNDLYITDYCIWIQKVKSKKLTTLAESLQNLKVTKNDLGFELE
DLEKXALLVQEEENEIKPDKSGPQSLASESEAEEDNGSEELSSSSFNGRESDSDESDSSK
CSSSEELYGKGLSRRAEANCKTEVKAKEDLIKSNCGEETVHTDATRDPDKCPLGETSTAK
SPPRRLMEELADQLQSVGFSEPCEKSAAENSXHKPTSLPLQSLAQYQHSQTTSQQTFLEV
SPKRNCLLLVADPVNTEDFTNLA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgcctgcctttgaattaagtcaagagcctaatttcctcaccattataatccat
gtcccgtatgcaaaagttaatgaagttgacctgtatattgatggagtggacttcaaattc
tatgcaaagccatacttcttaaggttaactcttccaggaaggatagtggaggatggcaga
gaaaaggcttcttatgacgctgatacagggaccttaactataaaggttccaaaagagacc
cccgacgaatactttgaggggttgaatatgctgactgcacttcttgcaccgaaaggttca
agatctgcaaaaccactgctggaagagatcggaccctccatcaatgccgaagaggaggaa
gaagaatttgactgggaaattgagcaaagtccctttgttcatttggaaggcaatgttata
aactccagctgcttctatggctttgcgaacctgagatcaggagtcttcgaaagattgcag
cacgaactcagtgatgtgattgacctgaaggaaccagatcacacaacaatggttgaacgt
cgacagaaacggttagctgctgaagagaccaagtttgattctgatcattatcttgcggat
ctgtttgaggatgatgcgattcagcacttactgacatatggaccctggtgggcaaacact
cgggaggcaaaaaaagtgaagaaaacccaaaatgaacagcatttgatggatccaggaagc
cagtttgtcaaattttctaaagatgaaaaagagcagttacgaaacttcaccaacaagagt
tatctgctggatagaaggtcttgccagaatgtttacctcggcctgcttgacattctcctt
gcatatgcctatgaagtccgcagtacagaaggggaagccaatactgaatcctcatggaac
atctggaaactgagtgggacactctgttggcttgaaacgtaccattctcttcaagaagtt
cttgtatccttcagcagaagagttttgtgttatcccttttacagacacttccagttggct
ttgaaagctgttgaggatgcagtgctaatacttcagctgggtaagtctgcagttctgaag
tgcctgctgggcatccatcagatcttccgcgagagtgaccctgcatacctccttaatgac
ctctacatcaccgactactgcatttggattcagaaagtcaaatcaaagaaacttacaacc
ctggctgagtcactgcagaatttaaaagtcactaagaatgatttgggcttcgaactggag
gatctggaaaagncagcactattagttcaggaggaagaaaatgagatcaaaccagacaag
agtggtccccaatcactggcatcagaaagtgaggcagaagaggataatggctccgaggaa
ttaagtagctcatcctttaatggcagggagtctgattcagacgaaagcgattcgtctaag
tgcagtagttctgaggaattgtacggaaagggtttgagtcgccgagcagaggctaactgt
aaaactgaggtgaaagctaaagaggatttgatcaaatcgaactgtggcgaagaaactgtg
cacacggatgccacacgggatccagataaatgtccattgggggagacttccactgctaaa
tcacctccgagaagattgatggaagaacttgcagatcagttgcagtcagtagggttttca
gagccctgtgaaaaatctgctgctgagaattcanngcacaaacccacaagcctgcctctt
cagagtttggcacagtatcagcattcacagacgacctcacagcagactttcttagaggtg
tctcctaagaggaattgcctgctgctcgttgcagatcctgttaatactgaggattttaca
aacctggcatga
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