KEGG   Scyliorhinus canicula (smaller spotted catshark): 119973127
Entry
119973127         CDS       T11175                                 
Name
(RefSeq) protein NEDD1-like isoform X1
  KO
K16547  protein NEDD1
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:scau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:scau03036]
    119973127
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:scau04812]
    119973127
Chromosome and associated proteins [BR:scau03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     119973127
   Microtubules and associated factors
    gamma-tubulin ring complex
     119973127
Cytoskeleton proteins [BR:scau04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     119973127
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR36-Utp21_1st WD40 Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd WD40_WDHD1_1st WD40_RFWD3 ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_DCAF12 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_VPS8 NBCH_WD40 KNTC1_N Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_LRRK2 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR75_1st PEP5_VPS11_N
Other DBs
NCBI-GeneID: 119973127
NCBI-ProteinID: XP_038666638
LinkDB
Position
11:complement(71241101..71341145)
AA seq 558 aa
MLIICRRTFTLELIGNCWIMEETLKLVSAGDCIQIWNLLLFYPEARFNPHTSEQEVSSLC
WSPNNQFLLSAASGGDRISVSICKTKPVHLWSIAEQRGQICVSLNSTRNMVLSGGTDCTV
NMWDLKTRNLHKSYKGHKGIVTCLTNDWDDHCVLSGSLSGEIILHDMLNDEVPPTYCCRN
HQPLRDLKISCFQRSLLGSVGDDGTLALWDLNTLQLQHSFDYVHKAPAKALCFSPVIEPL
IVTVGLDKHISAFDVRSKSILYNIRADSPLTAIELLPDGTTLVIGCSQGKVSLYDLRNME
FPVKSSKAHSSAVRCIKLQTVRGKFQVAWPTAWSNVKGGGFNISTIDTSNEDVSTFPSDS
STLQVSTITPNKPPQFRKVIFLARNSFGDIFSPIRSDITATELSLTPPNSCTSNCFPLTQ
SVGNLSKISELFSEDACDQVQNLHNCNSKQEMIEQKPYPKTLANTLSNPSIQPGKEGTRQ
AVSVAKTQLLQNMVKDALEEFSDAHHKEVVGLQLAMIHEFHIQQIAIREAVLKHLVGEEL
LKEFVTLKEENKRLKEFH
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgttgataatttgcagaagaacgtttactttggaactgattggtaattgttggataatg
gaggaaacgctgaagcttgtatccgcaggagattgtatccagatctggaacctgctactg
ttttacccagaggctcgctttaaccctcacacatctgagcaagaagtgtcctctctttgt
tggagccccaataatcagttcctattgagtgctgccagtggaggtgacagaatttctgtg
tccatctgtaaaaccaagccggtgcatctttggagtattgcagaacagaggggccagatt
tgtgtctcattgaattcaacaaggaatatggttctgagtggagggacagattgcactgtc
aacatgtgggacctgaaaaccaggaatctccataaatcctacaagggtcacaagggcata
gtgacttgtttaaccaatgattgggatgaccattgcgtgctgtcagggtctctgagtggt
gaaattattctgcacgatatgctgaatgatgaagttccccccacgtattgctgtcgcaat
catcagcccctccgtgacctgaaaatctcttgcttccaacgctctctgttgggaagtgtc
ggcgatgatgggacccttgcattgtgggacctgaacactttacagctacaacatagcttt
gactatgtccacaaagcccctgcaaaagcactttgtttctctccggtgattgagccatta
attgtcacagttggccttgataagcatatctcagcttttgatgtacggagtaaatccata
ttgtacaatattcgagcagactctcctctaactgcaattgaactcctgccagatgggacc
actctggtgattggatgctctcaaggaaaggtcagcctgtatgacctcagaaacatggaa
tttccagtgaaatcttcaaaagctcacagcagtgctgtacggtgcattaaacttcagaca
gtgagagggaagtttcaggttgcttggcccactgcttggagcaatgtgaagggaggaggc
ttcaatatatcaacaattgataccagtaatgaggatgtatctaccttccccagtgattcc
tctactttacaggttagcactatcactccaaacaaacctccacaatttagaaaggtaata
tttctcgcaaggaacagttttggagatatcttctcgcccatcagatcagatattacagcc
accgaattgagcttgactcctccgaactcctgtacctcaaattgttttcctctgactcaa
agtgtgggaaatctgagtaaaatatcagagctgttcagtgaagatgcctgtgaccaagtg
caaaacctacacaattgtaattcaaaacaggaaatgattgaacaaaaaccgtatcctaag
actctggctaataccctgagtaatccttctatccaaccaggcaaagagggaacaagacaa
gcagtttccgtggccaagacccagttactacaaaacatggtgaaagatgccttggaagaa
ttcagtgatgcgcaccataaagaggttgttggactgcagctggccatgatccatgaattt
cacattcaacagattgcaattcgtgaagctgtacttaagcacttagtcggtgaagaattg
ctgaaggaatttgtgactttaaaagaagaaaataaaaggctgaaagaatttcactga

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