Scyliorhinus canicula (smaller spotted catshark): 119973197
Help
Entry
119973197 CDS
T11175
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119973197 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119973197 (mbd4)
03400 DNA repair and recombination proteins [BR:
scau03400
]
119973197 (mbd4)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
119973197 (mbd4)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
119973197 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Clr2_transil
MBL_MAP1B
Motif
Other DBs
NCBI-GeneID:
119973197
NCBI-ProteinID:
XP_038666777
LinkDB
All DBs
Position
11:complement(93464347..93517050)
Genome browser
AA seq
540 aa
AA seq
DB search
MEAPPCGEISKDELCFQKEPPKQHALNLKLAGTEKTESLLSEAGPIIHALDPEIPRRCYS
ELPEGWKRVVKERKTGKSSGKFDIYIISPQGKQFRSSKELENYFQRGAGEESLKAEVLDV
FWRGCKRRRITSAKRTALLQTNTSPTQDIDKLPVSLPQTVSHVPHNAEREDGPEIEGNCN
KSKRLRKVEVKTASKQKPKKDANPQNTTRLCSRRSSARARQKKQSSTEVKELSDGAPAAG
TRASPKPKRKYSSRKSKEQAANSKKQLPKEQAFKSKDPLEHHVEGHSEPVSEVPVFNRKM
AAMSKEGNADAITFPLISDVNLGIHASQTHCSKSEITCENSDRDAKDSDGDRFTLLKTQE
NHPSPRVKLDRRKTSPYFSRKYSKGASSPPRRKAFAKWIPPRSPFKLVQETLFHDPWKLL
IATILLNKTSGKKAIPVLWDFLERYPSAEVARVADWKEVAELLRPLGLYELRAKAIAKFS
DEFLTKQWRYPIELHGIGKYGNDSYRIFCVKEWKEVQPQDHKLNKYWAWLWENQETLGLS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcctccttgtggtgagatcagcaaagatgaactttgtttccaaaaagaacca
ccaaaacaacatgccttaaatctcaagttagcaggtactgaaaaaacagaatctttgttg
tctgaagctgggcctatcattcacgctttggatcctgaaatacccagaagatgttactct
gaacttccagaaggatggaagagagtagtgaaagaaagaaaaactgggaagtcatcagga
aaatttgacatttacattataagtcctcaggggaagcaatttcgatcttcaaaggagctt
gaaaattactttcagagaggtgctggagaagaaagtctaaaggccgaggtccttgatgtc
ttctggcgaggctgtaaacggagaaggattacctctgctaaacggacggcattgttgcag
accaatacatcaccaacccaagacatcgataaattgcctgttagccttccacaaactgtg
tcacatgtgccacataatgccgagagagaggatggacctgaaattgagggtaactgcaat
aagagcaaaagactgaggaaagtagaggttaaaactgcctcaaaacagaaacctaaaaaa
gatgcaaacccacaaaacacaaccagactgtgttccagaagatcgtctgcaagagccaga
cagaaaaagcagtcatcaactgaagtgaaggagctgagtgatggagctccagctgctgga
acaagagcaagtccaaaacccaagagaaaatatagcagcagaaagtccaaagaacaagca
gcaaacagcaaaaagcagcttccaaaggagcaggcatttaaaagcaaggacccactggaa
catcatgtagaaggacatagtgagccagtctctgaggtaccagtgtttaacagaaagatg
gcagcgatgagcaaggaaggcaatgctgatgccatcacattccctctaatttctgatgta
aacctaggcattcacgcttcacaaacacattgctccaaatcagaaattacttgtgaaaat
tctgacagagacgcaaaggattctgatggggacaggtttacattgctgaaaacccaagag
aatcatccttctccaagagtgaagctagacaggaggaagaccagtccatatttttccagg
aaatattccaaaggagcatccagcccaccacggcgcaaggcctttgctaagtggattcct
cctcgatccccatttaaactggtccaagagacactttttcatgatccctggaagcttctc
attgcaaccatacttcttaataaaacctctggtaaaaaagccattcctgtgctgtgggat
ttcctggaaagatacccttctgctgaagtggcccgggtagctgattggaaggaggtagca
gaacttctgagaccacttggcctatatgagctgagagccaaagccatcgctaagttttct
gatgagttcctgaccaaacaatggaggtacccgattgaattgcatggaattgggaagtac
gggaatgattcctacaggattttctgtgttaaagaatggaaggaggtacagcctcaagat
cacaaactcaacaagtactgggcgtggctttgggagaatcaggagacattgggcctgtcc
tga
DBGET
integrated database retrieval system
