Scyliorhinus canicula (smaller spotted catshark): 119973222
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Entry
119973222 CDS
T11175
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119973222 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119973222 (nedd1)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
119973222 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
119973222 (nedd1)
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
119973222 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WD40_RFWD3
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_like
Beta-prop_DCAF4
Beta-prop_LRRK2
NRBF2
Beta-prop_IFT140_1st
KNTC1_N
FliM
NBCH_WD40
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
119973222
NCBI-ProteinID:
XP_038666816
LinkDB
All DBs
Position
11:complement(100208195..100286358)
Genome browser
AA seq
699 aa
AA seq
DB search
MRETGLQTASLSKQDGINFFMFNSQVSCCHRIIEKLQHRRRPFGPSCPCQPEDIQCLVSS
SSSGDKIVLSSCRSTPVPIKDLAEGKKQTCLSLNSTSKCIVSGGLDNTVNIWDIKSKRSH
RTLTDHREEVNSVCFNWNDYYIASGSRSGDIIVHSITTNISSAPFGHGKTQPVQNLKYSI
FKKALLGSVHDSGTVTLWDVNTQQPYHTFENAHKAPASGLCFSPVNDLLFATVGLDKKIN
CYDSSSKMLLRTISVEAPLTAIDFMTDGATLAVGSIRGKIYVYDLRVTTSPLKIVSAHKK
SIRCLKFQNGSTQFKSNGGKSFASRGSSSLSTAAAKRISAKVNSASGSGSTKEIQELTAL
MSAPAVKVPPAIIEQKGTEANLDAKGLSHSTSLDVIPSKETENARRADNSGNLKNLDCVG
RNSFGDVFSPIRDDVAETKTGEDSIAKGNGSGFLPQLNTIFSTRSNPVGASTQEELSSNS
LQGFGSPSPIKEQASQRDMIAIFNKLQSARPDLKEPVGQDNDVVGMSKSNMIEHNGQLET
ARLDQLNSSVAECGTLGTPLTSSMVKTPDVCERKGREIQFPQGCLEHGTTTSGAKMMMPT
SGVPKVSDKIVETFGSDGIGQQLTSVQIQLVRTIIQETLEDYKDAWHRDIVNLQLEMIKQ
FQIQQNEIHGLLEKYSVNEALVAENERLREENKRLRATF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaacaggtttgcaaacagcatccttaagtaagcaggacggaattaatttcttc
atgttcaattcccaggtttcctgttgtcatagaatcatagaaaagttacagcacagaagg
aggccatttggcccatcttgtccatgtcagccagaggacatccagtgtttggtgagctca
tccagcagtggtgacaagatagtgctgtcatcctgcagatctactccagttcctataaaa
gatcttgctgaagggaaaaagcagacatgtctgagtctgaattccacttccaagtgtatt
gtgagtggaggccttgataacacggtcaacatctgggacataaagtcgaagagatctcat
aggacacttacggatcacagggaagaggtcaatagtgtatgtttcaattggaatgactac
tatatagcatcaggttcacgcagcggcgatatcattgtacacagtatcacaactaatatt
tccagtgctccatttggtcacggtaaaacacagccagtgcaaaatctgaagtattccatc
tttaagaaagctttactgggaagtgtccatgacagtggaactgtaaccctttgggatgtt
aatacgcaacaaccttaccatacctttgaaaatgctcacaaggctccagcatctggactg
tgcttctcaccagtgaatgatttattgtttgccacagttggtttggataaaaagatcaac
tgctatgactcatccagcaagatgctgttgagaactatttctgttgaagctcctttgact
gcgatagactttatgactgatggagcaactttggctgtcggatccatcaggggcaaaatt
tatgtctatgatttacgagtgacaacttcaccactaaaaattgtcagtgcccacaagaaa
tctatacgctgcttaaagtttcagaatggttctacgcaattcaagtcaaatggaggtaaa
agctttgcaagcagggggtcatcctcattgtccactgcggctgctaagaggatttcagct
aaggtgaacagtgcctcaggtagcggcagtacaaaggaaatccaggagcttactgcattg
atgtctgcaccagctgtcaaagtacctcctgctattatagaacaaaaaggaactgaagct
aatctggatgcaaaaggtttatcacacagcaccagtttggatgtcattccatccaaagag
acagaaaatgcaagaagagcagacaacagtggcaacttaaaaaaccttgattgtgtgggt
agaaacagctttggggacgtgttctcaccaatcagagatgatgttgcagaaacaaagact
ggtgaagacagcattgcaaaaggaaatggttcgggctttttgccacagttgaacaccata
ttttccacaagaagtaatcccgtgggtgccagtacacaggaagagttgagctcgaactcc
ttacagggttttggatctccatctcccattaaagaacaggcttcacaacgagacatgatt
gccatatttaacaaactgcagagtgcaagaccagatttaaaagagccagttggccaggat
aatgatgtcgtaggaatgagcaagtccaatatgattgagcacaatggtcagttggaaact
gcaaggctggatcagttaaactcttctgttgctgagtgtgggaccttggggacacctcta
acatcttccatggtgaaaacacctgatgtatgtgaaagaaaaggaagagaaattcagttt
cctcagggatgcctggagcacgggaccactacatctggtgccaagatgatgatgcctaca
tcaggagttccgaaggtgtctgacaaaattgtggagacttttggaagtgatggcattggg
caacaattaacatctgttcaaattcagttagtcaggaccattatacaagaaactttggag
gattacaaagatgcgtggcatcgagacattgtaaacttgcagctggagatgatcaagcaa
ttccaaatccaacagaatgaaatccatggtttacttgaaaagtattctgttaatgaagct
ttggtggcagaaaatgagagattacgagaagagaataaaaggctgcgtgctacattttaa
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