Scyliorhinus canicula (smaller spotted catshark): 119973223
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Entry
119973223 CDS
T11175
Symbol
cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
scau03037
]
119973223 (cfap54)
Cilium and associated proteins [BR:
scau03037
]
Motile cilia and associated proteins
Sperm associated proteins
119973223 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
Motif
Other DBs
NCBI-GeneID:
119973223
NCBI-ProteinID:
XP_038666822
LinkDB
All DBs
Position
11:complement(100325106..101088647)
Genome browser
AA seq
3201 aa
AA seq
DB search
MEPMPAKFYGKLDEKNPVVASLEQKLNHFMKNMESATSHNSYTRGANDLSCIWNTYEKLL
PDHYYHEKLLKIGDFLQQMKFYKLASWQCYGRYLQQFGSFRIDDITDVNTFKTIFLPDQF
EIESASLTLHSLQMNSICNYNIVKEADPRLLKLESQSKCTSILKFLRLIMQVALPKEPLC
WLIFNGTIYIYTICRHLMVLALYAKAFEYILWAAICMETSFPLSTVRYLRWRTTLYTAVC
QCYYDCECDIVGETFARRALGKISELSQLETMHPSPQTHGVAKIFREATVKVSVMIFKRA
VIESRRKPKGILRPKQRTNYKESHNLPWPHNPTEQLLAEMFQGSAAQFLAITETLSGASR
RVLQTKPPTPSEHEVFDVTTELFLAGILLLSGGGGNTQLNAAACTDPVGGINISSSLIEL
AATGEDGVSVEAAVRFVKSVFCYEYLEIFDGIIAPLLTFLRKHENPAWRGYELDLDLLIT
MEPFVSARKPRHGLSGGGSCAIGGTIQPGGTVISCDDLVILAEAMFAYTCTPLEGAIPDI
DMVVDAVLFLWQKCKTVLQRGNFGIIGSTKYLKKMDNFGKWMHILSILQEVTIWCHLGDV
DPVVLVDITLYSAGLLETLADSCVKSKRKPGNAAAHEIQSDTATSTQTAGITIQTEHCSP
TNILTKHPAEQLDIACRMLEKGLDSIEIARSATVSVDKTSLCDTSCMKLDNYNYWSSSLS
NQIKESDVPEEDSSKVTALGAFIMDLHLELFQVYYRVAFKLLKMNCETPNYENYNQETIG
PHENYGFTISTEADIIKKVKKNNVLKAVFLIQKVMFFYNKDHDQSSRNHLLEKAATLLQK
AEAEEKMLYLLSTQQPTTDNQKLGVVPAPILLSRSHNSMIFKPAHFTSSEKVCWYRIFAR
TATGSILKVRLQDSMLRGTGHEVPAFGECLLEVKGIEPNEKYIFAVAGYSEDGTIIGDEI
GHTTKPILAYYPLPILTAWTSLCQAAYQLGHYSVSKLAFSVLWEHFVSQECQIPADEGFV
SDQTKCSISQKSLNKKALSLASPILLRNFLGSIFIDSDISCQEDAIYCDTLSDNGPLYKG
QLRRLAKCERMLIVIEIAGWINDANQALQAVVQCYGLLAPMIFHRIPSTPVVQILTKCLC
VLQDVIGAYRQRKQFGITESLQHMTACVTFYLAKILQCWKEYNLALEVVIIGKEILFAAI
QETAPEQKAGGTEDEAETMQNKWENTIDQEKLAIENSMHVKSADDALADLESKEALTRSE
AVIYTTILFAPITVAYNAVMKFKEKNRFLEYFVLLLHRLVREEYYTQITDWVNDVIVSLR
RRNKGLLGKKKTSGKKTPSKPLKNTAVVVEYHNTPSKKPKKEKITLRELVQSFHKNPAYK
LDQNAYRKQKEKLEKKAKEVFRTLLRPIISRYLRLKKFNKFCMIEMPWRSQLNMLLGILC
FHSFMKYYEDDTWTSKNISRYSILDPEIFTLHSCGGLLLNPEIHDSDIMQQIPVTSMFAI
RKKEKSTDSDQGWNDAISESTESSHTPVTQIGEESDSIAEEVGKPSTRAILMFDQLGKSF
LHIKRAVVLAHRGGHWTALQNACRFMWNCAHNAMMYITSVESLKETVLTTDRVKNIFCLP
FYLAAQTLLDMVVQLQNTYSNIKFVDPNGIFSVPSCVGSISDDHGGYSLKFEQPLDDVNV
VDLHLVCSLALYSIELLCHQKKWESLVFLAIHFNAVTHERFTEKVTPFLVFAQHQLRKRI
REFNGPAPPQPHFVKAAEEGTVINSRNFHRCQLKISMSAYQDGSFDLDKNVSSGSKSANA
LVSVPVNTMDTLSSFRESLLHIKYVSSALRHSRKLLALLLAYTQQKRKDIMKRVPGTVGF
TVSPTPIESSKPADLSTENFLVFDDILCKPLPQSQIPLVILSYANTIELLQMNGQKSLCA
QALHEQGNVYFYAGNRRAAFRCWCHAIDAIFNTTDFINNWKNSESSNISLEHSKDYSEFL
LDQAGIWGCLLAGVLSAKIAQLIISSDFSFRIDCCILSSFLFKGLFRTTFPHPRSDREYA
SYEVGFDCAVVELIPGIDLFSDRFRADVRTVVGSLDFVIHELHSVKQNLKALPLLTLYQY
FVSAICRDVHRSVQARILKGRVLTDLSLFTEAFDEQCTLLNGGKLPHALLDCFRFPDSKI
QMTFDQSKSLLSDNLLAIQDLLSIPLSQTLRSLYGPYLVNKFELGRTNLAIKLAETINCI
PETSHFLCSNNLTNPDDRTIDLDTDYVHLMTELKDMHGFENTCQSDIKRLDLYSFKNRLK
MSQLKEFMLSEAQNKLNIFMDTIKLEYNVVLANLAPAELEMTIDAKCQAAAIALQRLQLA
FSAAIALSAIQLLKRSKILVTQKQYFTKNPSTAFKNTMKTNTSTEDQVTKILYQEPHNVE
ACARLHLGLWLKCRLVLLTAVTSQLYGIGLKTDEGFLEAARLCEEGIEEAKANGLVELQT
EFMLQAVLLDFRLGRVKDYIKTLLQKIIELLNTRRFISPSAQMILAQAILQLTDLRKTET
LCTSKDVVMQEKISQCLSAQKLIIDQLVSLGESVQHQANGRIYSMPVFPLKNIYLPHIIL
LAKIKLRLGSASAQLTVCSAERWNSASWQEPHSCFSTGLNLCKNAASKEYDVEAEILFQK
GKILRQIAQVHYEKTLEAANCFMEAINITYCHEQNLWLMRQAYLELVLLYFNLDEDEEKE
AENSLKHEMTLENKLSVKSGLILVPKAPKKKITGQGRLIEILQYVLKAPSKYKLLAWVAI
RAANEIVRTMSNTQILIRDQAVDEENIKSLVHNILDEFVILDTFASHHDYQTENDELLPT
LTAIQGVKVEEKGQENKEMAPVENPNMMASYRKAAEKLKSIQLLHYINHLHRLYNINLLP
VRNPVENVETERTDNLGHNIPFTEPSEAQMHGVDIDFKKCAINDVEDGVRTPVFNTSMCL
RLALMHIFLKTYLPSYKVNCSADLIPVILYEMFDGSFMFPDFHPEVYTSVFGEFVLTSPK
DSYTGQLTPQMSIAVHSIDKELCVQWYLPALALPPASCETQKILLLFAYNVKPVTLISLK
TSTLTNASCGYKWIHLKRLISLHKKLSALKQKAEAYLKPEHAPSSSLQRSQNRTKQRYSR
SESTTNVRKLPILLEDMVMQLCREIKELFVLESDMKPEAEVPFDLSFDTLEQLEQVFNPA
VGYTLKYGSLFKWLISFMEME
NT seq
9606 nt
NT seq
+upstream
nt +downstream
nt
atggagccaatgcccgccaagttttatgggaagttggatgagaaaaacccagttgtagct
tcgcttgaacaaaagctcaaccactttatgaaaaatatggagagcgcgacttcccacaac
tcgtacacgagaggagccaatgatttatcttgcatctggaacacatatgagaaactgtta
ccagatcattattaccacgaaaaattgctgaagattggggattttcttcaacaaatgaag
ttctataaattggcctcgtggcagtgttatggacggtacctgcaacagttcggttctttc
aggattgatgacattacagatgtcaatacgtttaagaccatctttttaccagatcaattt
gaaattgagagtgccagcttaacgcttcattcgttacaaatgaacagcatttgtaattac
aatattgtgaaagaagctgatccaagattgttgaaactggagtcacagagcaagtgcaca
agcattcttaagttccttcgactcattatgcaagtggccctgcccaaagaaccgctttgc
tggcttatttttaatggtaccatttacatttacaccatttgcagacatttgatggtttta
gcactttatgctaaggcctttgaatatatactgtgggcagccatctgcatggaaacatct
tttccactttccacagttcgctatctaagatggaggaccaccctttatactgccgtgtgt
cagtgttactatgactgtgaatgtgacatagttggagagacatttgctcggcgtgcttta
ggcaaaatcagtgaactaagccagctggaaactatgcacccctctcctcaaactcatgga
gttgcaaagatctttagagaggccactgtcaaggtgtcagtgatgatctttaaaagagca
gtaattgaaagtagaagaaaaccaaaaggaattttgcgtcccaaacaaagaactaactac
aaagaatctcataatttaccctggccacacaatcccacagaacaattgttggcagaaatg
tttcaaggcagtgcagctcagttccttgctattacagagacattgtcaggtgccagtaga
cgtgtgctacagactaagcctcccactccttctgaacatgaagtatttgatgtgacaact
gaacttttcctggctggaatcctactcctctcaggtggtggtggtaatactcagcttaat
gcagctgcctgcacagacccggttggtgggataaacatatcaagttcccttatagagctt
gcagccaccggtgaagatggtgtgtccgtggaagctgctgttaggtttgtgaagagtgtg
ttctgttatgagtacttggaaatatttgatggcatcattgcaccacttctcactttctta
aggaaacacgaaaatccggcctggcggggttatgaactggatttggatctactgattact
atggaaccatttgtttcagcacgcaagccaaggcatggtctttcaggaggaggaagctgt
gcaataggtggaacaattcaacctggtgggactgtcatttcatgtgatgatcttgtgata
ttagcagaagcaatgtttgcttacacctgtacccctctggagggtgccatcccagacata
gacatggttgttgatgccgttctttttctgtggcaaaagtgcaagactgttctacagaga
ggcaactttgggattattggttctactaaatacctaaagaagatggataactttgggaag
tggatgcatatcctgtccatacttcaagaagtgactatttggtgccatttaggagatgtt
gatcctgtagtattggtagatattacactatactcagcagggttgctggaaacactggct
gattcatgtgtgaaatccaaaagaaagccaggtaatgctgctgcacatgagattcaaagt
gacactgcaacatcgacacaaactgcagggataaccatacaaacagaacactgttctcca
acaaacattttaacgaaacaccctgctgaacaacttgatattgcatgtagaatgctcgag
aaaggactggatagcatagaaatagctcgttcagcaactgtttcagtagacaaaacctcg
ctgtgtgacactagctgtatgaagctagacaattataattactggtcctctagcttatcg
aatcaaatcaaagaatctgatgtacccgaagaagattcatctaaagtgacagctctcggt
gctttcatcatggatttacatctggagctttttcaggtttattacagagtggcatttaaa
ctcctcaaaatgaattgtgagacaccaaactacgaaaattacaatcaagaaaccattggt
cctcatgaaaattatggttttaccatttcaacagaggcagacatcattaagaaagtcaag
aaaaacaacgtgttgaaggctgtatttctgattcaaaaagtgatgtttttctacaacaag
gaccatgaccaatcttccagaaaccaccttcttgagaaagctgcaactctgctgcagaag
gctgaagctgaggagaagatgctatatttgttaagcacacaacagccaacaacagataac
caaaagcttggtgttgtaccagcccccattctgctgtccagatcacacaattctatgata
ttcaaaccagctcattttacttcatctgaaaaggtttgctggtatcgcatatttgctcgt
actgcaacaggaagcattcttaaagtacggctgcaggattcgatgcttcgaggtacaggg
cacgaggtaccagcatttggcgagtgtttactcgaggtaaaaggcatcgaacctaatgaa
aaatacatctttgcagttgctggttattcagaagatggaacaatcattggagatgaaata
ggacacacaacaaagccaattttagcatattatcctcttcctattcttacagcttggacc
tctctttgtcaggcggcatatcaattgggacattattcagtatcaaaactagctttctca
gttttgtgggagcactttgtctcacaggaatgccaaataccagcagatgaagggtttgtt
tctgaccagaccaaatgttccatctctcagaaaagcttaaacaaaaaggctctatctttg
gcatctcccatccttctgcggaattttctgggaagcatcttcatcgattccgatattagt
tgccaggaagatgctatttactgtgacactctgtctgataatggaccgctttacaaagga
cagcttcgtagactggctaaatgtgaaagaatgctgatagtcattgaaattgccggttgg
atcaatgatgccaatcaagcactccaggctgtggtccagtgctatggacttcttgcaccc
atgatctttcacagaattccttcaactccagttgtccagattctcacaaaatgcctgtgt
gtcctacaagatgttattggtgcctacaggcaaaggaaacagtttggaataaccgaaagt
ttgcaacacatgactgcttgtgttactttttatttagcaaagatattacaatgctggaaa
gagtataatcttgctttagaagtcgtaattatcggaaaggagattctgtttgctgcaatt
caggaaactgcaccagaacaaaaggctgggggaactgaggatgaagctgaaacaatgcag
aacaaatgggaaaacaccattgaccaagagaaattagcaattgagaactcaatgcatgtg
aagtcagcggatgacgctttggctgatctggaaagcaaagaagctttgactcgaagtgaa
gctgtgatttacacaaccatcttatttgcaccaataactgttgcttacaatgcagtcatg
aagtttaaagaaaaaaatcgattcctggaatattttgtcctgctcctgcacagactggta
cgagaagagtattatacacaaataacagattgggtgaacgacgttattgtgtctttacga
aggcggaacaaaggtcttcttggcaaaaagaaaacatctgggaaaaaaactccaagtaaa
cccctgaaaaatacagcagttgtcgttgagtatcacaatactccaagcaaaaagccaaaa
aaagaaaagataacattgagggaactcgtgcagagctttcacaaaaacccagcctataaa
ctggaccaaaatgcatataggaaacaaaaagaaaaattggaaaagaaagcaaaggaagtt
tttcgtacgctgcttcgaccaattatcagtcgttacctgcgacttaaaaagttcaacaaa
ttttgtatgatcgagatgccatggcgtagtcagttaaatatgctattgggaattctctgt
tttcattcattcatgaagtattatgaagacgacacttggacctcaaaaaacattagcaga
tattctattttggaccctgaaatttttactctacatagctgtggtggtttactcctgaac
ccggagattcatgattcagatattatgcaacaaattcctgtaacatcaatgttcgcaatc
agaaaaaaagaaaagtcaacagattcagatcaaggctggaatgatgccatttctgaaagc
actgaaagcagtcacacaccagtgactcagattggtgaagaatctgattccattgcagaa
gaagtgggcaaaccaagcacgagagccatattgatgttcgaccaactgggcaaatcattt
ttacacatcaagagagcagtggtgcttgcacaccgtggaggccattggacagcgttgcag
aatgcctgtcgatttatgtggaattgtgcacataatgcaatgatgtacattacctctgtg
gagtcgctgaaagaaacggttttgactacagacagagtcaagaatatcttttgtctacca
ttctacttagctgcacagactctccttgatatggtagtgcaactacagaacacctacagt
aatatcaagtttgttgatccaaatggcatctttagtgttcctagctgtgttggaagtata
tcagatgatcatgggggatatagtctgaaatttgaacagccacttgacgatgtaaatgtg
gtggatttacacttggtgtgttctttagcactgtactctatagaattactctgccatcag
aaaaagtgggaaagcttagtcttcttagccatccacttcaacgcagttacacatgaaagg
ttcactgagaaggtgactccattcttggtgttcgcccaacaccaacttcgtaaaaggatc
agggaattcaatggtccagctcctccacagcctcattttgtaaaagctgcagaagaagga
acagttataaattccagaaactttcacagatgtcagttgaagatttcaatgtctgcatac
caagatggctcttttgatcttgataagaacgtgtcctcggggagcaaaagtgcaaatgct
ttggtgtccgttccagtgaatacgatggatacactctccagcttcagggaatcactgctc
cacattaaatatgtgagcagtgccctcagacatagcaggaaactcttggcattactcctg
gcttacacacagcaaaaacggaaagacatcatgaaacgtgtacctggaactgttgggttc
actgtatcaccaacacccattgaaagttccaagcctgctgacctgtctactgaaaacttt
cttgtatttgatgatatcttgtgtaagcctctgcctcagtcacagattccacttgtgatt
ttatcttatgcaaataccattgagctacttcaaatgaatgggcagaagagtttgtgtgca
caggccctccatgaacaaggaaatgtttacttctatgcaggaaacaggagagcagctttt
cgatgttggtgccatgcaattgatgcaatatttaatacgactgactttataaataactgg
aaaaactctgaaagcagcaacatttcattggaacattctaaagattacagtgaattcttg
ctggatcaagccggtatttggggttgtttactggctggagttttatctgcgaaaatagct
cagttgattatatcatcagacttcagcttcagaattgattgctgcatcttatcttcattt
ttatttaagggtctgttcaggaccacgtttccacacccgaggtctgatcgtgagtatgca
tcatatgaagtaggatttgactgtgctgttgttgaactcattcctgggattgatctcttc
tcagaccgattcagagctgacgtgcgcacagtggtgggaagtctagattttgtgatccat
gagctacacagtgttaagcaaaacctaaaggctctacctttgttgactctttaccagtac
tttgtcagtgcaatctgccgtgatgtacacagaagtgttcaagcaaggatactaaagggc
agggttttgacagacttgagcctctttacagaagcatttgatgaacaatgtaccttgctt
aatggcggaaagctcccacatgcacttttagactgtttcagatttccagattccaagatt
cagatgacgtttgatcaatcaaagtcactcttatctgataatttgctggcaattcaggac
ctactcagtatacctttgtctcagactttacgtagcctttatggtccttaccttgtgaat
aaatttgaacttggccggaccaaccttgccatcaaacttgctgaaactataaactgcatc
ccagaaacatcacatttcctatgttcaaacaatttaacaaatccagatgatcggacgata
gatttggatacagattatgtgcatttaatgactgaattaaaagatatgcatgggtttgaa
aatacatgccaatcagacataaagagactggacctttattcctttaaaaacagactaaag
atgtcccagttgaaggagttcatgttgtcagaagctcaaaacaagttgaacattttcatg
gacactatcaagcttgaatataatgttgtattagctaatcttgcacctgctgaactagag
atgaccattgatgctaaatgtcaggctgcagccattgctttacaaaggttgcagctagca
ttcagtgctgccattgcattatctgcaattcaactcttaaaaagatccaaaatcttggtg
acacagaaacaatattttacaaagaacccttcaacagcattcaagaacacaatgaaaacg
aacacttcaactgaggaccaggtcactaaaattctgtatcaagagcctcacaacgtggaa
gcctgtgcacgtttgcatttgggtctttggttgaaatgtcggttggttctgttgactgcc
gtgacttctcaactatatggcattggactaaagacagatgaaggttttctggaagctgct
cggctctgtgaagaagggatcgaagaagcaaaggccaatggtcttgttgaattgcaaact
gagtttatgctgcaggctgttctgcttgatttccgactgggacgtgttaaggattacatc
aaaacgcttttgcagaaaattatagagctactaaatacaagacggtttatttcacctagt
gcccaaatgattcttgcccaagctattcttcaattgaccgatttaagaaaaacagaaacg
ttgtgcacctcaaaagatgttgtcatgcaggagaagatcagtcagtgtctttcagcccag
aaactgattattgatcagcttgtttcactgggtgaaagtgtgcagcatcaagcaaatgga
agaatttactccatgccagtattcccattgaaaaacatctatttgccacacattatcttg
ctggcaaaaattaaactaagactaggtagcgcttcagcacagctgacagtatgctcagct
gaaaggtggaactcagcatcatggcaagaaccacattcctgtttcagtacaggccttaac
ctttgcaaaaatgcagcatctaaggaatacgatgtagaagcagaaatcctatttcaaaaa
ggaaagattcttcgccaaattgcacaagtacattatgagaaaacccttgaagctgcaaat
tgtttcatggaagcgatcaacatcacttactgtcatgagcaaaatctctggttgatgagg
caagcatatttagaactcgttttgttatacttcaaccttgatgaggatgaagagaaggaa
gcagagaacagtttaaaacatgaaatgacattagaaaacaaactgtcagtgaaatcagga
ctaattttagttccaaaagcacctaaaaaaaagattactggccaaggacgattgatagaa
atattgcaatatgtattgaaggcgccttcaaaatataaattgctggcatgggttgccatc
agagctgcaaacgagatcgtcagaacaatgtccaacacccagatattgattagagaccag
gcagtcgatgaagaaaacataaaaagcctcgtacataatatactggacgaatttgtaatt
ctggatacttttgcatcacatcatgattatcaaactgaaaatgatgaattgctgccaacc
ttaactgccatacaaggagtaaaagtggaagaaaagggacaggaaaataaagaaatggca
ccagttgaaaatccaaatatgatggcatcatacagaaaggctgcagaaaaactgaaatca
atccagcttctacattacattaaccacctccacaggctgtacaacattaatctacttcca
gttcgaaatccagttgaaaatgtggagactgaaaggacagataatttggggcacaacatt
ccttttactgaaccttctgaggcacaaatgcatggagttgatatagatttcaagaagtgt
gctataaatgacgtcgaagatggagttcgtacacctgtatttaacacaagcatgtgtcta
cgtctggcattaatgcatatatttctaaagacctacctaccttcatataaagtgaattgc
agcgcagatctaattcctgtaatcctatatgaaatgtttgatggcagttttatgtttccg
gatttccatcctgaagtatatacaagtgtctttggggaatttgttcttacatccccaaag
gatagttacactggtcaacttactcctcagatgagcattgcagtacattctatagacaaa
gagctgtgtgtccaatggtatctgccagctctggcactgcctcctgcaagctgtgaaact
cagaagatcttacttctgtttgcctacaatgtgaagcctgtcactttgatcagcctcaag
acaagcacgttaactaatgcttcttgtggatacaaatggattcatttaaaacgacttatt
tcgttacacaagaaactttctgcattaaagcaaaaggctgaggcgtacttgaaaccagaa
catgcaccatccagttcattgcagcggagtcagaacaggacaaagcaaagatattctcga
agtgaatcgacaacaaatgttagaaaactacctatattgctggaagatatggttatgcag
ctatgcagagaaataaaagaattgtttgttcttgaatcagacatgaagcctgaggcagag
gttccatttgacctttccttcgataccctggagcaattggaacaagtatttaatcctgcg
gttggctacacattaaagtatggctctctgttcaagtggctaatttctttcatggaaatg
gagtaa
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