Scyliorhinus canicula (smaller spotted catshark): 119973237
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Entry
119973237 CDS
T11175
Symbol
fgd6
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 6 isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scau04990
]
119973237 (fgd6)
Domain-containing proteins not elsewhere classified [BR:
scau04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
119973237 (fgd6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
RHG20_PH
PH_8
Motif
Other DBs
NCBI-GeneID:
119973237
NCBI-ProteinID:
XP_038666852
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All DBs
Position
11:103327089..103571085
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AA seq
1421 aa
AA seq
DB search
MSAEIKKPPVAPKPRFVLGKKPPPPPVAPKPDIIRFEPLSTHRGPKPALAPKPTLSKVTP
VAEVKPTPLRNNKCSEGFKREVNENVKCPACQGFGDGMQKRGYELTHRCIKSNCSCKTEN
EYKYINGENTYKTQIVVDHLSKLEALENNKKCDQTHYSSRIQHRPETQCGRTVNRYQTIS
KTGFPEQKFKDVLTQVVSPNNYLPKQKDVYCDADVKLHGFNNGQSELFYTDQTFQNVRNC
KRNPGEPFIDGKKDNEVKNDADQSEKVMRNGKNCDSTGIDHKERVTNSQLKVPFIVTEKE
KLTIRNTNSLLATSTSTSVPCTKPAPMPKPKKARLIGLSRQNCIDNSAVDAVDPSVKCSD
SHFKAPGGIIVDFKKSFGSIDASGVSRCNSESSYQTVKMNNAFLQDNSYKPSQAKDYCNQ
SVLSTKKPVLDAVSKIKITSDLQNRSKIEQIKKNLESSNRTLPADKGSFIRSSSLSMSLP
KYLSLSYDPKVPALKNETGTDFERVTSNEEMSTKSDISPKTVPEKPQRHSLPASAIVKRD
LSAGNDMGASGSMENDSEQGLGSLSSIETNSNEHKAIHLSEKPIWKLPHPILPFLGTPNS
VTLASTSQNNEALITKPRAKSLSSADSEKLERSPKEPSKKNSLKRILGLKLSAKMKTDFQ
KFLTKGSYSLDSAPDGLPSVENKDNNHYIPGSLKGNQKNKPVKAHSVDSYNQNAKKDRIL
KSSSDFPNNFPAEQQSLTDLHKEYPPNSKTQLIEPQSLSPKYENISANFDWKSSSSIEDC
DAIYEIQPYAVSSCYQKYRDTQKNQGTSPIQDQDNHSSEMDINSDEEVIFSSDEEDTSSD
TSKGELDQQDEKQNDEGKKTKVYHIAREIMSSEKVFVDVLKLLHIDFRDSVIQSSRQYGK
QVIEDKILNQILYYLPQLYELNRGLLRELEERMAHWDEHQRIADIFMEKGPYLKMYSTYI
KEFDKNVCLLDEQCKKNPMFAAVVREFEMSSRCANLALKHYLLKPVQRIPQYKLLLTDYV
KNLSRDCADYEDTQAALAIVVEVANHANDIMKQGDNFQKLMQIQYSLNGQQEIVQPGRVF
LKEGTLMKLSRKVMQPRMFFLLNDVLLYTTPVQSGMYKLNNMLSLAGMKVSKPSQEAYQN
ELNIESVERSFILSASSAAERDEWLEAISKAIEDYTKKRITFTASKSLEEEPDKPELNTP
LGTKAPIWIPDPRATMCMICTCDFTLTWRRHHCRACGKIVCQACSSNKFNLDYLKNQPAR
VCDHCFSELQKIEEQSSDTKMLSPTHRSSSALTSVFHSIQHSSGRKHKKIPAALKEVSAN
TGASSMSGYLYRSKGIKKPWKRLWFVIQDKVLYTYAASEDVAASESQPLLGFTVSEVQDD
LSEPKVIFQLLHKRTLFYVFKAEDCHTARRWVEVFQEATVL
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagaaattaagaagccaccagtggcccctaaaccccgatttgttttgggaaag
aagccacctcctcctccagttgcaccaaaacctgacatcatcagatttgaaccattatca
acacacagaggaccaaaaccagcattagcaccaaaaccaacattgtcaaaagttacacct
gtggctgaagtaaagccaacaccactacgaaataataaatgctcagagggatttaagcga
gaagtgaatgaaaatgtgaagtgtccagcttgccaaggttttggtgatggaatgcaaaag
agaggctatgaattgactcatcgttgcattaaatcaaactgctcatgtaaaactgaaaat
gaatataaatacataaatggtgaaaatacatataaaacacaaattgttgttgaccacttg
tccaaactggaggctttggaaaataacaagaaatgtgaccaaacacattattcctcaagg
atacagcacaggccagaaactcagtgtggcagaacagttaacaggtaccagacaattagc
aaaactggtttcccagagcagaaatttaaagatgtcctaactcaggttgtatcgccaaac
aattatcttccaaaacaaaaagatgtgtattgtgatgcagatgtcaaattgcacggtttc
aacaatggacaaagtgaactattttatactgaccaaacctttcaaaatgtaagaaattgt
aaaagaaatccaggagagccatttattgatgggaagaaagacaatgaggttaaaaatgat
gctgatcaatcagaaaaagtgatgagaaatggaaagaattgcgactctactggcattgat
cacaaagagagggtgactaacagtcagctgaaagttccatttatagttacagaaaaggag
aaattgaccattcggaatactaactctttacttgccacttcaacatccacttcagtgcct
tgcaccaaaccagctcctatgccaaagccaaagaaagcacgcttaattggtctcagcagg
caaaactgtatagacaacagtgcggtagatgctgtggatccaagtgtgaaatgcagtgat
tctcacttcaaggctccaggtggaattattgtagatttcaagaagtcatttggttctata
gatgctagtggtgtctctcggtgtaacagtgaaagttcatatcagactgtcaagatgaat
aatgcattcttacaagataattcttacaagccaagtcaggcaaaagattattgtaatcaa
agtgtcttgtccaccaaaaagccagttctggatgctgtctccaaaatcaaaatcacttca
gacttgcaaaatagaagtaaaatagaacaaataaagaaaaatttggaaagcagtaacaga
acattgccagcagacaagggcagttttattagaagtagttctctctccatgagtttgccc
aagtacctcagtttgtcatatgatccaaaagtgcctgcattaaaaaatgagactggtaca
gattttgagagagtaactagcaatgaagaaatgtccactaagtcggacatttctccaaag
actgttccagaaaagccacagcgtcacagcctgcctgcatctgctatagttaagagggat
ttgtcagcaggcaatgacatgggtgcaagtggttcaatggaaaatgattcagaacaagga
cttggcagcttatccagcatagaaactaatagtaatgaacacaaagcaattcatctgagt
gagaaacctatatggaaattgccacatcctattttgccttttctggggactcccaacagt
gtgacactagcaagtacttcacaaaataatgaagctttgatcacaaaaccaagagctaaa
tccttgtcatctgctgattctgaaaaactggaaaggtcaccaaaagagccttcaaagaaa
aattcactaaagaggattcttggtttaaaactctctgctaaaatgaaaacggattttcag
aaatttttgacaaaaggtagctattcactagacagtgcaccagatggacttccatctgtg
gaaaataaagacaataatcactacattccagggtcactgaaaggcaatcaaaagaataaa
cctgtgaaagcgcattctgtggattcctacaaccaaaatgcaaagaaagaccgtatactc
aaaagctcctctgattttccaaataactttcctgctgaacagcaatctcttactgacctg
cataaagaatatccaccgaattctaaaacacaactgattgagccacagtctctctctcct
aaatatgaaaacatcagtgccaattttgattggaaaagttcttccagtattgaagactgt
gatgctatttatgagatacaaccctatgcagtgtcaagctgctatcaaaaatacagagac
acgcagaagaaccagggtaccagccctatacaggatcaggataaccattcttcagaaatg
gacatcaactcagatgaagaagtaatttttagctccgatgaggaagataccagttcagat
acaagtaaaggagaactggatcagcaagacgagaagcagaatgacgaagggaagaaaacc
aaagtttatcatattgccagagaaatcatgagctcagagaaagtatttgtggatgttttg
aagcttttgcacattgatttccgggattcagtgatccaatcttcaagacagtatggaaaa
caagtgattgaagataagatcttgaaccagatcctgtactacctgccacagctgtatgaa
ctaaatcggggtctgctgcgagaactagaagagagaatggctcactgggatgagcatcag
agaatagctgatatcttcatggagaaggggccatacctcaagatgtactcaacctatatc
aaagagtttgacaagaacgtttgtttgttggatgaacagtgcaagaagaaccctatgttt
gctgctgtagttagagaatttgagatgagctctcgctgcgcaaacctggcactcaaacat
tacttgttaaaacctgtccagaggattccacagtacaagctgctcctgacagattatgtg
aagaacctgtctagagattgtgctgactatgaagatactcaagctgcacttgccattgtt
gtagaagtagcaaaccatgcaaatgacataatgaaacaaggagataacttccagaagctg
atgcagattcagtatagcctaaatggccaacaagaaattgtacagcctggaagggtcttt
ttgaaggaaggaactttgatgaagctgtccaggaaggttatgcaaccacgaatgttcttt
ttgctgaatgacgtgttactgtacactacgccggtacaatctggaatgtacaagcttaac
aacatgctttctctagcaggtatgaaggtcagtaagccatctcaagaagcttatcagaat
gaactgaacatagagagtgtggaacggtcattcattctatcagcaagttcagcggcagaa
agagatgaatggttagaagccatttccaaggccattgaagactatacaaaaaaaaggata
acattcactgcaagcaaaagtcttgaggaagaaccagataaaccagaactaaatacacct
ttaggcactaaagcacccatttggatccctgatcctcgtgctaccatgtgtatgatctgc
acatgtgactttacacttacctggaggcggcatcattgtcgagcatgtggaaagattgtt
tgtcaggcctgctcatcaaacaaatttaacctggactaccttaaaaaccaacctgctaga
gtttgtgatcactgcttctcagaactacaaaagatagaagaacagtcatctgatacgaag
atgctgtctccgactcacagatcatcaagtgccctcacctcggtttttcacagcattcag
cattcttcagggcggaagcacaagaaaattcctgcagcactgaaagaagtatctgctaac
actggagcttcatctatgagtggctacctttataggtctaaagggattaagaaaccatgg
aaacggctctggtttgtcattcaggataaggtgttatatacttatgctgccagtgaggat
gtagctgcatcagagagccaaccactgctcggattcacagtttctgaagtccaggacgac
ctttcagaacccaaagtgattttccaattgcttcataagagaacactgttctatgtgttt
aaagcagaggattgtcatactgcccggaggtgggtagaagtttttcaagaagctactgtg
ttataa
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