Scyliorhinus canicula (smaller spotted catshark): 119973285
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Entry
119973285 CDS
T11175
Symbol
recql
Name
(RefSeq) ATP-dependent DNA helicase Q1 isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scau03400
]
119973285 (recql)
Enzymes [BR:
scau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119973285 (recql)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
119973285 (recql)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
RQC
SecA_DEAD
KOW
KOW4_SPT5
Plasmodium_Vir
YabA
BBS7_hp
KOW5_SPT5
SlyX
NinF
EMC3_TMCO1
Flagellar_rod
UPF0449
Motif
Other DBs
NCBI-GeneID:
119973285
NCBI-ProteinID:
XP_038666999
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All DBs
Position
11:110646438..110680759
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AA seq
646 aa
AA seq
DB search
MADVSDLEEQLALVDSEMDALEVQMQELLERQQELQEKKRQLKKKIEKLSGNNEGGSSAI
SRVSAEDWNKKGFSWSPKVDEALKSVFNLQNFRSLQLQAINVTMAGKDIFLIMPTGGGKS
LCYELPAVCSTGFTLVICPLISLMEDQLMVLEQLGIPSAMLNSNSTKEHVKWVHDEMLNK
SSKLKLLYVTPEKIAKSKVFMSKLEKAYHAGCLTRIAVDEVHCCSQWGHDFRPDYKSLGI
LKRQFPNTPLIGLTATATNSILEDVKKILCVPKCLMLTASFNRPNLFYEIRQKPSNSEAC
VEDMVRIINGRYKGKSGIVYCLSQKDTEQLTISLQNLGISAGCYHGNMEATAKSKVHRDW
TLNKIKVVVATVAFGMGIDKADVRFVLHQTLSKSMENYYQESGRAGRDDLKADCILYYGF
MDIFRQSTMVVMENVGQQKLYEMVAYCQDLKRCRRAQIAQYFDEVWDSTKCNKMCDNCNN
EISDEKVDVTSFCADLIKILKQAEQLSEKLTPLKLIEAWNGKGPSKLRVASVRPPNLSRN
EMEELIVHLLLEQYLKEDFSFTAFATISYLKVAPKANLLSNTKHVISMRMKVRNNKLGSS
TEEVPEKDKSAQQNETGSKRKQTSTADKVTPSKKSKALKDIPLILD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtttcagatctggaggagcaattagcattggttgacagtgagatggacgcc
ttggaagtccagatgcaggaactgcttgagagacagcaagagctgcaggaaaagaaacga
caactaaagaagaagatagaaaaactgtctgggaataacgagggtggatcaagcgcaata
tcaagggtatctgcagaggactggaacaaaaaaggtttttcatggtcaccgaaggttgat
gaggctttgaagagtgtgtttaatctgcaaaatttccgatcattgcagcttcaggccatc
aacgttactatggcagggaaggatatatttctgataatgccaacaggtggtgggaagagc
ttgtgctacgagctgccagctgtctgctccactggattcactctggtaatctgtccatta
atctcattgatggaagatcaattaatggtcctagaacaattgggcatcccatccgccatg
ctgaattccaacagcactaaggagcatgtaaagtgggtccatgatgaaatgctcaacaag
tcctctaagttgaagctcctgtatgtgaccccagagaaaattgctaaaagtaaagtcttc
atgtccaagctcgaaaaggcataccatgctggctgcttgacccgtattgctgttgatgaa
gttcattgttgcagtcagtggggtcatgacttcaggcctgactacaagagcctcggtatc
ctgaagcgtcagttcccaaatactccgttgattggattgacagcaactgcaacaaacagt
atcttagaggatgtgaaaaaaatcttgtgcgttcccaaatgtctcatgttgactgcttcc
ttcaacagacccaatctgttttatgagatccggcaaaaaccatccaattctgaagcctgt
gtcgaagatatggtcaggatcatcaatggacgttacaaaggaaaatcaggaatcgtctat
tgcctttctcaaaaagatactgagcagctcaccatcagtcttcaaaaccttggcatttcg
gctgggtgttaccacggtaacatggaggctactgcaaagagtaaagttcatagggactgg
actttaaacaaaataaaggttgtcgtggcaacagtggcatttggcatgggtatcgacaaa
gctgatgtacgatttgtgcttcatcagactctcagtaaatccatggagaattattaccaa
gagagtgggcgagcaggtcgagatgaccttaaagccgattgcattctgtactacgggttt
atggatatcttcaggcaaagcacaatggtggtcatggaaaacgtaggacaacagaaactt
tatgagatggtggcatactgtcaggatttaaaaagatgtcgacgtgcgcagatagcacaa
tattttgatgaagtctgggattcaacaaagtgcaataagatgtgtgacaactgcaacaat
gaaatttcagatgaaaaggtcgatgtaaccagtttttgtgctgatctgatcaaaatacta
aaacaagctgagcagctcagtgaaaagctcaccccactgaagttaattgaagcctggaat
ggaaagggtccctctaaactgagggtggcttcagtacgccctccaaatctttccagaaat
gaaatggaagaactaattgtccatcttcttctagagcaatacttgaaagaagacttcagc
tttactgcattcgccacaatttcatacctgaaggtggcacccaaggccaatctcttgagt
aatacgaagcatgtcatttccatgcgtatgaaagtgagaaataacaagctaggttcttct
actgaggaagtaccagaaaaagacaaaagtgctcagcagaacgagactgggagtaagcgt
aaacaaacatccactgcagacaaagtaacccccagcaagaaaagcaaggcgctcaaggat
ataccactcatcctggactga
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