Scyliorhinus canicula (smaller spotted catshark): 119973289
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Entry
119973289 CDS
T11175
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
119973289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119973289
Transporters [BR:
scau02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
119973289
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
119973289
NCBI-ProteinID:
XP_038667008
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Position
11:complement(111004668..111108601)
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AA seq
749 aa
AA seq
DB search
MTIWGWDSGGWRNRVTHKKKLFSLSLIRVSKITLPAANTLHLSEGLCGQHTASSFAMENP
QEQNVASRTEFPPVKQKRFNNVKLFLAALSCLYFAKTLSGSYMKSTITQLERRFDVPSSL
IGVLDGSFEIGNLLVIVFVSYFGAKFHRPRLMAAGSIVMAIGTFLIASPHFFMGRYNYES
TLTFSSNLTTSTSQCSNMSNSTLTQGLGETSSDKPLPGCEEEAGSSMWIYILLGNLLRGI
GETPTGPLGISYLDDYSSEENTSFYLGILYTVALIGPLFGYLLGSFCAKLFVDIGFVDLE
RVTITSKDARWVGAWWLGFLIAGAFSLLFSVPFWFFPKSLTKETQKEERGKTSEKLEFII
QDQSEPVGNKPVPKISTLDKGFFSALKALFSNSLYVLLLLSLVIQMNSFIGMLTFKPKFI
EQQYGQSASRTNFIIGLINIPAVCLGLFLGGYVMKRFKLTIVQAAKMSIGCAVAGWLLTI
SYFGMGCDNSRVAGLTISYEGAPQISYEGSALHHDCNAHCFCPRTQWEPVCAGTGVTYVS
PCLAGCKASTGIGRDTVFHNCSCISAFGNSSALLGQCSGSDGCGNTFIYFMVVTVFSAFA
FSFGAVPGYMILLRCNEPELKSLAIGVYTLIGRTLAGIPAPIYFGALIDTTCLKWGTNRC
GGRGACRIYNSDTFRHIFLGLQVSMRGVGMLVFYFILTTLMKRFPAKDHCPESKCGTEMM
PDQGKDHKPDNGDLSATAPITDSDKESNV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgacaatttggggttgggattcaggcgggtggaggaatcgtgtcacacacaaaaaaaaa
ctcttcagcctctctctcatcagggtttcaaaaattactcttccagcagcgaacactttg
cacctctcggaggggttgtgtggacaacacaccgcttccagcttcgcaatggaaaatcca
caagagcaaaatgtggcttcgaggactgagttcccgcccgtaaaacagaaacgatttaat
aatgtgaagctctttctggcagccttgtcgtgcttgtactttgcgaaaacgttgtctggg
agctatatgaagagcacaatcacacagctcgagagacgatttgatgtaccaagctcacta
attggtgttctcgatggaagctttgaaatcgggaatttgttggtgattgtgtttgtgagc
tactttggagccaaatttcacaggcccagattaatggcagccggaagcatagtcatggct
attggaaccttcttaatagcttcgcctcatttcttcatgggacgttacaactatgaatct
acacttacgttttcgagcaatttgaccacaagtacctcccaatgttcaaacatgtcaaac
agcacattaacccaaggactaggggagacctcctcagacaagccccttcctggttgtgag
gaagaggcaggctcctccatgtggatctacatattgcttggaaatcttttgcgaggaatt
ggtgaaacaccgactggaccattggggatatcatatctcgatgattattcttcagaagaa
aatacttctttttatttaggaattttgtatacagtggccctcataggcccattgtttgga
tatttattgggatcattctgcgccaagctttttgttgacattggatttgttgacttggag
agagtcacaattacttcgaaggatgcaagatgggttggtgcttggtggcttgggttttta
attgccggagcattttcccttcttttttccgtaccattctggttctttcccaagtcgcta
accaaagagacacaaaaggaagaacgtggcaagacctctgaaaaactggaatttatcatc
caggaccaaagtgaacctgtcggaaataagcctgtaccaaagatttcaacactagacaag
ggtttcttttcagctttgaaagcactgttttcaaacagcctctacgtactgttattgttg
tcattggtcatacaaatgaattctttcattggcatgttgacctttaaacccaagttcatt
gaacagcagtatggacagtcagcatccagaaccaacttcatcatcggtctcataaatatc
cctgcagtgtgccttggacttttcttgggtgggtatgtgatgaaaaggttcaagttaact
attgttcaagcagcgaagatgtccattggatgcgcagtcgcgggttggttattaacaatt
tcctattttggaatgggctgtgacaactcgcgtgtggctggtttaaccatctcctatgag
ggcgctccacagatctcctatgaaggaagtgctctacatcatgattgtaatgcgcactgc
ttttgcccacggacacagtgggagccggtttgtgctggtactggggtcacatatgtttca
ccatgtctcgctggctgtaaagcatctactggaatagggagagatacagtattccacaac
tgcagctgcatttctgcctttggaaattcctcagccctcctggggcagtgctcaggaagt
gacggatgtggaaacactttcatttacttcatggtggtcaccgtgttcagtgctttcgct
ttttcctttggagcggttcccggttacatgatcttactcaggtgcaatgagccggagctg
aaatcactggcaataggtgtatacaccctgataggaagaacacttgctggaattcctgct
cctatttactttggagctttgatagacacaacgtgcctgaaatggggaaccaacagatgt
gggggtcgaggggcctgcaggatttacaactccgatactttcaggcatatctttctgggc
ttacaagtgtcaatgcgtggagttggcatgctggtgttttattttattttgacgacattg
atgaaacgttttcctgccaaggaccactgcccagaatccaagtgtgggactgaaatgatg
cctgatcagggcaaggaccataaacctgacaatggagatctttcagctacagcacccatc
actgactcagacaaagaatcgaatgtttga
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