Scyliorhinus canicula (smaller spotted catshark): 119973313
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Entry
119973313 CDS
T11175
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119973313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119973313
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
119973313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
119973313
NCBI-ProteinID:
XP_038667095
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Position
11:complement(116620682..116875273)
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AA seq
579 aa
AA seq
DB search
MDMDEFERRREERRKKRDEMRREVERMTTQWTDNDEEELAKERRRKARQDRLRDSALSPD
TLEFNSQNSALDEETKVSRTQITMDEDNDIAERMQKREERRQKRLQEATERQQEIDITAK
EETHDTAKEIRRNEREREEEEENNQRNKWRQELEPEPEPEPEPEPEPEPEPEPELEPEPE
PEPEPEPEPEPEPEEVVMPKKKIVEENIEKPYQIEKKSQVWKEEIVERSEKKVSKAGPEN
GEALHEEIAQKHKKMERVLRWGECSRSESKSTQEAEEAAAKLEAERKLEELKRRQDEKES
EEFEKMKQKQQVAVVELEELKKKREGRRKVREEEEQKRQQDEAERKAKDEEEKRKLKEDI
ERRRAEAAEKRQKPEDIETTNDKEPFKCVSPRGSSLKIGERADFLNRSAKKSTTTKTSRP
VLGVSKIDSKLEQYTSAIEGAKAAKGGKSSASDLPLTAEGVRNIKSMWETGDVYSSASPT
NKGTPNKEVAGLKVGVAGRINQWLTKTPETNKSPASKPSDVKPGDVSSKRNLWENKTDSS
NGKSATPSKITAGSKYKSGSAGDHCGYANAGMVHYENEP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggatatggatgaatttgagcgccgtcgggaggaacgcaggaaaaagcgtgatgaaatg
cgccgtgaggtggaaagaatgaccactcagtggacagataacgatgaagaagaacttgct
aaagaacgccgtcgcaaagctcgtcaggaccgactgagggattctgcactcagcccggac
actctggaattcaattcccagaacagtgcattggatgaagaaaccaaggtttcgagaact
caaattacgatggatgaagacaatgatattgcagagcgaatgcagaaacgagaagagcga
cgccagaaacgtcttcaagaggccacggagcgccaacaggaaattgatataacagcgaaa
gaggaaactcacgataccgcaaaagaaatccgtagaaatgagagggagagggaggaggag
gaggaaaacaaccagcggaacaagtggcggcaagagttggagccagaacctgagccagaa
cctgagcctgaaccagaacctgagccagagccagagccagaactagagcctgaaccagaa
ccagagcctgaaccagaaccagaaccagagccagagccagaagaggtggtgatgccaaaa
aagaagattgtagaagaaaatattgaaaaaccatatcaaattgaaaagaaaagccaagta
tggaaggaagaaattgttgagcggtcagagaagaaggtatcaaaagcaggcccggagaac
ggagaggctctccacgaagagattgcacagaaacacaaaaaaatggaaagagtgttgagg
tggggggagtgcagccgttcagagtccaagtcgacccaagaggcagaggaagcggctgcc
aaacttgaggcagagcggaagttggaagagctgaaacgccgccaggacgagaaagagagc
gaagagtttgaaaagatgaaacagaaacagcaagtggctgtagtggagctggaggagctg
aagaagaagcgagaagggcgcaggaaggtacgagaagaggaagagcaaaagcggcaacag
gatgaggcggaaagaaaagcaaaggacgaggaggagaagaggaagctaaaggaagatatc
gagagacgaagagcagaggcagcggagaaacggcagaaaccagaagacattgaaacaacc
aatgataaagagcccttcaaatgtgtgagcccccgtggctcctctttaaaaattggagaa
agggcagactttttgaatagatcagcaaagaagagcactacaaccaagacttcacgccca
gtattgggtgtctccaagattgacagtaaattggagcagtataccagtgcaattgagggt
gccaaagctgcgaaaggaggcaaatcatcagcttcagatctcccactgacagcggaagga
gtgcggaacataaaaagcatgtgggaaactggtgatgtctatagttctgcttccccaact
aataagggaacaccgaacaaggaggtagcgggtctgaaagttggcgttgccggtcgcatc
aatcaatggctcaccaaaactcctgaaacaaacaaatcgcctgcgtctaaaccctcagat
gtgaaaccaggagatgtatcaagcaagcggaacctctgggagaataagactgattcttcc
aatggaaagtcagccaccccatctaagattacagctggaagtaagtacaagtcaggctca
gcaggcgatcactgtggttacgctaatgcagggatggtacattatgaaaacgaaccctaa
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