Scyliorhinus canicula (smaller spotted catshark): 119973338
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Entry
119973338 CDS
T11175
Name
(RefSeq) ATP-binding cassette sub-family D member 2-like
KO
K05676
ATP-binding cassette, subfamily D (ALD), member 2 [EC:
7.6.2.4
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau02010
ABC transporters
scau04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119973338
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119973338
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119973338
Enzymes [BR:
scau01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
119973338
Transporters [BR:
scau02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD2 subgroup
119973338
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_23
AAA_29
Rad17
Adeno_IVa2
SMC_N
ARID
ORC-CDC6-like
AAA_27
AAA_16
ATPase_2
AAA_5
Motif
Other DBs
NCBI-GeneID:
119973338
NCBI-ProteinID:
XP_038667149
LinkDB
All DBs
Position
11:complement(121088724..121211491)
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AA seq
728 aa
AA seq
DB search
MYQLLGAAAGAKWSKSRATRRAAFLLAAAYGARRLYPLLWQQLPGKAGPRGPAPRHAGAS
CPAKKAPAVDADFWQQLVGLGRILFPKLLTKELALLCLHSLALVSRTFLSIYVAGLDGKI
VKTIVEKKPRSFVLKLVKWLLVAIPATFVNSMIRYLECKLALAFRTRLVDHAYRTYFTDQ
TYYKVSNMDGRLENPDQSLTEDIMMFSQSIAHLYSNLTKPILDVMLTSYTLIQTATSRGA
NPTGPTLLAGLVVYATARVLRAFSPRFGKLVAEEAQRKGYLRYIHSRIIANAEEIAFYRG
HRVEMNQLQKSYKSLAAQMNLILSKRLWYIMLEQFLMKYVWSGSGLVMVAVPIITATGFA
DNESEDGHKQVSLVSERTEAFTTARNLLAAGADAIERIMSSYKEITELAGYTARVHNLFS
VFDEVQRGIYKRSTVDQEIETDCTKVKHGLHIEGPLEQKGQVIDVDVGIVCENVPIITPN
GEVVISSLNFKVDEGMHLLITGPNGCGKSSLFRILSGLWPVYGGLLYKPPPQHMFYIPQR
PYMSVGTLRDQVIYPDSVEDMNEKEYTDLDLEHILDIVHLNQIVQREGGWDAVTDWKDVL
SGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQTAKDSGISLLSITHRPSLWK
YHTHLLQFDGEGGWRFEQLDTATRLSLAEEKQRLESQLAGVPQMQQRLNELCRVLGEDSV
LRTTRIEE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagttgctgggcgccgcggccggggcgaaatggagcaagtcccgggccacccgg
agagccgccttcctgctcgccgccgcttacggcgcccggaggttgtacccgctcctctgg
cagcagctgccgggcaaagcagggccccggggcccggcgcctcggcacgcgggtgccagc
tgccccgccaagaaagcgccggccgtcgacgccgacttctggcagcagttggtgggtctg
ggcaggatcctcttcccgaagctgctcaccaaggagctggccttgctgtgcttgcactcg
ctggcgctggtttcgaggaccttcctctccatctacgtggccgggctggacggcaagatc
gtgaagaccatcgtggagaagaagcccaggagcttcgtgctgaagctggtcaagtggctg
ctggtggccatcccggccaccttcgtcaacagcatgatccgctacctggagtgcaagctg
gctctggcattccgcacccgcctggtggatcacgcctaccgcacctacttcaccgaccag
acctactacaaggtcagcaacatggacgggaggctggagaaccccgaccagtcgctgacg
gaggacatcatgatgttctcccagtccatcgcgcatctctactccaacctgaccaagccc
atcttggacgtgatgctgacctcctacaccctgatccagaccgccacttcgcggggagcc
aaccccaccggacccacgctccttgcggggcttgtggtgtacgccacagccagggtgctg
agagccttctctccgaggtttggtaagctggtggccgaagaagcccagaggaagggatac
ttgagatacatccattcacgtattatagccaatgcagaagagattgctttttacagggga
cacagggtggaaatgaaccagctacaaaaaagctacaagtcacttgctgcccagatgaat
cttattttgtccaaaagactttggtacattatgttggagcagtttctaatgaagtatgtg
tggagtgggagtggattagtgatggtagcagtaccaatcatcacagcaacaggttttgca
gacaatgagtcagaagatggacacaagcaagtaagtttggttagtgaacgaactgaagct
ttcaccactgcgcgcaatctgctggctgctggagctgatgcgattgaaagaattatgtct
tcatacaaagagatcactgaattggcaggctacacagctcgagtgcacaacttattttct
gtttttgatgaagttcagaggggaatatataagaggtccacagtcgatcaggaaattgaa
actgactgcaccaaagtgaaacatggattacacattgaaggtcctttggaacaaaaagga
caagttatcgacgttgatgtgggaattgtctgtgagaatgttccaattattaccccaaat
ggggaggttgttatttccagcttaaacttcaaggttgatgaaggcatgcatctccttatt
accggtccaaatggctgtggaaaaagttctttattcaggatactgagcggtctgtggcct
gtatatggagggttattgtataaacctcctcctcagcacatgttctacattccacagagg
ccttacatgtctgttggaactctaagagaccaagttatctacccagactctgtggaagac
atgaacgagaaagagtacacagatctggatctggagcatattctagacattgttcacctg
aaccaaatagtacagagagagggaggatgggatgcagttactgactggaaggatgtcttg
tctgggggtgagaaacaaaggatgggcatggcacgaatgttttatcacaaaccaaaatat
gcattgttggatgaatgcacaagtgctgtaagcattgatgttgaagggaagatatttcaa
acagcgaaggattccggaatctcgttgctttcaattactcacaggccatccctgtggaaa
tatcacacacacttgttacagtttgatggtgagggtggttggcgatttgaacaattggac
actgctacacgactttcactggctgaagaaaagcagagactcgagtctcaactggccgga
gtccctcaaatgcaacagcgactgaatgaactgtgcagggttttgggagaagactctgtg
ctacgaaccactagaattgaagaataa
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