Scyliorhinus canicula (smaller spotted catshark): 119973384
Help
Entry
119973384 CDS
T11175
Symbol
tbc1d22a
Name
(RefSeq) TBC1 domain family member 22A isoform X1
KO
K20360
TBC1 domain family member 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119973384 (tbc1d22a)
Membrane trafficking [BR:
scau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
119973384 (tbc1d22a)
Retrieval pathways
119973384 (tbc1d22a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
119973384
NCBI-ProteinID:
XP_038667331
LinkDB
All DBs
Position
11:128741701..129185901
Genome browser
AA seq
558 aa
AA seq
DB search
MSSEGGKKQFWKRNVSKVPGSIQHVYGAQHPPFDPLLHANLLKANSKSQSVSMRTKKVTS
FQEFESITSDAWDVGDDDDELLAMAAQNLNTDVVMETANKVLQIHSKLQEQKQQDKQIET
SPEQLDRLEQVNNKTDITRSTSAVELNRSGLDDFENTSLPRQQSVPSRSTIPLVARIADQ
NTSDAPLMTEREMFRLEKFRQLLAGPNTDLEELRKFSWSGIPRQVRPITWKLLSGYLPAN
AERRESTLQRKRAEYFAFIEHYYDSRNDEHHQDTYRQGQKMEKCFRQLFPETTVFLNHQI
AIDIPRMTPESLILQPKVREIHIDIPRTNPLIPLFQQASVQKIFERILFIWAIRHPASGY
VQGINDLVTPFFVVFVFEYIEGEVENFDVSSLPDEVLQNIEADSFWCMSKLLDGIQDNYT
FAQPGIQKKVKALQELVSRIDEQVHKHLKQSEVEYLQFAFRWMNNLLMRELPLRCTIRLW
DTYQSEPDGFSHFHLYVCAAFLVKWRKEILEEKDFQGLMILLQNLPTMHWGNEEISVLLA
ESYRLKYAFADAPNHYKR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaagggggcaagaagcagttttggaagcggaacgtttccaaggttccaggc
agtatacaacatgtatatggagcgcagcatccgccatttgatcctctgctacatgcaaac
ttacttaaagcaaattcaaagtcacaatctgtgtcaatgagaacaaagaaggttacgagt
ttccaggagtttgaaagtattacaagtgatgcttgggatgttggtgatgatgatgatgaa
ctcttggctatggctgctcaaaacctgaatacagatgttgttatggaaacagcaaataaa
gtacttcagattcatagcaaactacaagaacagaaacagcaggacaaacaaatcgagaca
tcaccagaacaattggaccgcttggaacaagtgaacaataaaactgacattactaggtcg
actagtgcagttgaacttaatagatcaggtttagatgattttgaaaacacttctcttcca
aggcagcaatcagttccttctagatcaacaattccattggtagcaagaattgcagaccaa
aatacctcagatgctcctttgatgactgaaagagaaatgtttcgtttggaaaaattcaga
cagctgctggcaggtccgaacactgacttagaagagttgaggaagttcagctggtctgga
atcccaagacaggttcgaccaattacgtggaaacttctttcaggttacttacctgccaat
gcagaaagaagagaaagcacactacagcggaagcgagcagagtactttgcttttattgaa
cattactatgactcgagaaatgatgaacatcatcaagatacttacagacagggtcagaaa
atggaaaaatgttttagacaactttttcctgaaaccactgtttttctaaaccatcagatt
gccatagatatacctcgtatgactcctgagagtttaatactgcaaccaaaagtaagagag
attcatattgatattccaagaactaatcctcttattcctctctttcaacaagcttctgtg
caaaagatctttgaacgcattcttttcatatgggcgataaggcacccagccagtggatat
gttcaagggataaatgaccttgttacgcctttctttgtagtcttcgtttttgaatacatt
gaaggagaggtggaaaattttgatgtttccagtttgcctgatgaagtgctgcaaaacatt
gaagctgacagtttctggtgcatgagcaaattgcttgatggtattcaggataactacact
tttgcacaaccaggaattcagaagaaggtaaaagcattgcaagagcttgttagccggatt
gatgaacaagtacataaacacttaaaacagtcagaagttgagtacctgcagtttgctttt
cggtggatgaataacctgctgatgagggaacttcccctgcggtgtaccatcaggttgtgg
gacacatatcagtctgaaccggacggattctcacatttccacctgtatgtttgtgctgcc
ttccttgtcaaatggaggaaagaaatattggaagaaaaagactttcagggactgatgatt
ctgctacagaatttacccacgatgcactggggaaacgaggagatcagcgttcttctggca
gagtcctacagactaaaatacgcatttgcggatgcaccaaatcactacaaacgatga
DBGET
integrated database retrieval system
