Scyliorhinus canicula (smaller spotted catshark): 119973389
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Entry
119973389 CDS
T11175
Symbol
prox1a
Name
(RefSeq) prospero homeobox protein 1a isoform X1
KO
K20211
prospero homeobox 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119973389 (prox1a)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain PROS
119973389 (prox1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HPD
Mu_Gam-Sipho_Gp157-TOTE
DUF2968
NifQ
Metal_resist
Motif
Other DBs
NCBI-GeneID:
119973389
NCBI-ProteinID:
XP_038667351
LinkDB
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Position
1:252057084..252189383
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AA seq
758 aa
AA seq
DB search
MPDHDSIALLTRHTKRRRVDIGVKRTVGTSTVFTKAKVKLFSAMNPHGSDQDIECSVVQH
TDGDKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNATKNGSLELNLQASGLSSAGS
EANQEDACSNSSRESAQECLSPFSRPSMSQFDVDRLCDEHLRAKRARVENIIRGMSHSPN
VALRGGENDRDGMQQPVSPRESYRENKRKQKLPQQQQQSFQQLVTARKEQKREERRQLKQ
QLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNMSEDSMQSETADTRAHDRSDNEMSDLDP
GHFLDRARALIREQEMAAENEKLKRDGHSRKSQGPTNLHAEGKQLAETLKQELNSTMSQV
VDSVVKMFSKSSHQLPQVFPPIQIPQARFAVNGENHNFHTTNQRLQCFGDVIISNPLNTF
ANMHVSNSSDQTEALPLVVRKNSSEQSASTPSMGGHHSSLHQSPLSAAAGFSSPAFRHPL
PLPLMAYSFQSSLGNASSTVSGKDRSSPESLDLTRETTCLRTKVSSHHMNHRPCSPLHPS
STAEGLSLSLIKSECGDLQDMADISPYSGNTIQEGLSPNHLKKAKLMFFYTRYPSSNMLK
MFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQSINDGVTSTEELTVSRDSELFRA
LNMHYNKANDFESCSYSNEVQGPIPEVARTSPMHVQQVPERFLEVAQITLREFFNAIVAG
KDVDPSWKKAIYKVICKLDSEVPEVFKSPNCLQELLHE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccatgacagcatagccctcttaactagacatacgaaaagacgcagggtcgac
attggagtgaagagaactgtagggacatctacagtgtttactaaagcgaaagtgaagcta
ttcagtgccatgaatccccacggttcagatcaggacattgagtgctcagtggttcaacat
acagatggggacaaatcaaatgtgctccgcaagctgttgaagagggcaaactcatatgaa
gatgccatgatgccttttcctggagctaccataatttctcagctattaaaaaataatgcc
accaagaatggaagcttggagctcaatttgcaagccagtggtctctccagtgcaggctca
gaagcaaatcaggaggatgcctgtagcaattcttcaagggaaagtgcccaagaatgcctg
tcaccatttagcagaccgagcatgagccagtttgatgtcgatcggctttgtgatgaacat
ctgcgggctaaacgtgcccgagttgagaacataattcgaggcatgagccattcaccaaat
gtggcattgcggggtggagagaatgatcgtgatgggatgcagcagcctgtgagccccaga
gaaagttatagggaaaataaacgtaagcagaagcttccgcaacaacagcaacagagtttc
caacaattggttacagcccggaaagagcaaaagagagaagaacgtcgtcaattgaagcaa
cagctggaagacatgcagaaacaactgcgacagctccaggaaaaattctaccaaatatac
gacagtacagattcggagaacgatgaagatggcaacatgtctgaagacagcatgcaatca
gaaactgctgatactagggcacatgaccggtctgacaatgagatgtcggatctagatcca
ggacacttccttgatcgtgctcgtgctcttattagggaacaggaaatggcagcagaaaat
gaaaaattaaagagggatggtcactcgagaaaaagccaaggcccaaccaacttgcatgct
gaagggaaacagctagctgagactcttaaacaggaacttaattccaccatgtcacaagta
gtggactctgtagtcaaaatgttctctaaatcctcccaccagcttcctcaggtcttccca
cctatccagattccacaggcacgatttgctgtgaatggggagaatcacaacttccatact
actaatcagcggcttcagtgctttggtgatgtaataatttccaacccgttgaacactttt
gccaacatgcatgtatctaactcttcagaccagacagaagcactgcctctagtagtacgc
aaaaactcatcagagcaatctgcctccaccccttctatgggtggccatcacagctctctt
catcagtccccactctcagccgcagcaggattttcatcccctgccttccgccacccgctg
cctctccctcttatggcttattcctttcagagctctctgggtaatgcttccagcacagtt
tccgggaaagatcggtcatcacctgagtccttggacttgaccagggaaaccacctgtctg
cggaccaaagtgtcatcacaccacatgaaccatcgtccttgctcaccgctgcatccatcc
agcacagctgaaggtctctctttgtccctcattaaatctgagtgtggtgacttgcaggac
atggcagacatttcaccatattctggaaatacaatacaggaaggactgtcaccaaatcac
ctgaaaaaggccaagctgatgttcttctacacccggtaccctagttccaatatgctgaag
atgttcttctctgatgtgaagtttaataggtgcatcacctcacagcttatcaagtggttc
agcaatttccgagaattttactacatccagatggagaagttcgctcgtcagtctattaac
gatggagtaacaagcaccgaggagttaactgtctcccgtgactctgagctcttcagagcc
ttgaatatgcactacaacaaagcaaacgattttgagagctgttcctattcgaatgaggtc
caaggcccaatacctgaagttgctcggacctctcccatgcacgtgcagcaggttccggag
aggttcttggaagtggctcagatcacattacgagagtttttcaatgccattgttgcaggc
aaagacgttgatccttcctggaagaaggccatctacaaggtcatttgcaagctggacagc
gaggtccctgaggttttcaaatctccaaactgcctacaagagctactacatgagtaa
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