Scyliorhinus canicula (smaller spotted catshark): 119973441
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Entry
119973441 CDS
T11175
Symbol
psmc2
Name
(RefSeq) 26S proteasome regulatory subunit 7 isoform X1
KO
K03061
26S proteasome regulatory subunit T1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
119973441 (psmc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
scau03051
]
119973441 (psmc2)
Proteasome [BR:
scau03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
119973441 (psmc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PRS7_OB
AAA_lid_3
AAA_22
AAA_2
AAA_5
AAA_16
DUF815
nSTAND3
RuvB_N
AAA_28
AAA_7
AAA_14
Prot_ATP_ID_OB_C
AAA_33
AAA_18
TIP49
Sigma54_activ_2
Mg_chelatase
RNA_helicase
AAA_24
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
119973441
NCBI-ProteinID:
XP_038667496
LinkDB
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Position
11:142073422..142097631
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AA seq
434 aa
AA seq
DB search
MPDYLGTDQRKAKEETKEEDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKI
NELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFA
KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGG
CKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIR
VIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTM
LELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHA
RSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKS
YAKFSATPRYMTYN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgccggattacttaggaaccgatcagcgtaaagctaaggaagaaactaaggaagaagat
aaaccgatccgcgcattagatgaaggggatattgccctcctgaagacctacggtcagagt
acctattccagacaaatcaaacaagtggaggatgacatccagcagcttctcaagaaaatt
aatgagctgacaggtatcaaagagtctgacactggtctggctcctccagcgctatgggat
ctggcagcagacaaacagactctgcaaagtgagcaacctttgcaggttgcaagatgtaca
aaaatcattaatgcagattcagaagatcccaagtacatcattaacgtgaaacagtttgca
aaatttgtggttgatttgagtgaccaggtagctcccactgacattgaggaaggaatgaga
gttggtgttgaccgaaacaaataccaaattcatattccactgcctccaaagattgatccc
acagttaccatgatgcaggtggaagaaaagccagatgtaacctacagtgatgttggtggc
tgcaaagagcagatagagaaattaagggaggttgtggaaactcctttgctgcatccagaa
cgttttgtgaaccttggtattgaaccaccgaagggagtgctgttatttgggccaccagga
acaggcaaaaccctctgtgcacgagctgtcgcaaacaggacggatgcctgcttcataaga
gtaattggatctgaactggtgcagaagtacgttggagagggggctcgaatggttcgtgaa
ctttttgagatggcaagaacaaagaaagcttgtttaatattctttgatgagattgatgca
attggaggcgctcgttttgatgacggtgctggtggtgacaatgaagttcaacgaacaatg
ctggagctcatcaaccaacttgatggttttgatccgaggggcaatattaaagtactaatg
gccacaaacaggcctgataccttggatccagctctgatgagacctgggcgtttagaccgc
aaaattgaattcagtttaccagatcttgagggacgaactcacattttcaaaatccatgca
cgttctatgagtgtggagagggacataagatttgaattgcttgctcgtctgtgtcctaat
agtacaggagctgagatccgcagtgtttgcaccgaagctggaatgtttgctatccgagca
cgccgaaaaattgccaccgagaaagatttcttggaagctgtgaataaagttatcaagtca
tacgccaagttcagcgctactccaagatacatgacctataattaa
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