Scyliorhinus canicula (smaller spotted catshark): 119973478
Help
Entry
119973478 CDS
T11175
Symbol
shank3a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PDZ_6
PDZ
SH3_2
SH3_9
FERM_f0
Motif
Other DBs
NCBI-GeneID:
119973478
NCBI-ProteinID:
XP_038667617
LinkDB
All DBs
Position
11:146678352..147763730
Genome browser
AA seq
1662 aa
AA seq
DB search
MSMVSAQTMPLSPTARKHEEEQQQNTCNCSESEEESFSRGDTIYHTIRTGTAAKAANQMD
NPAPSTVVIRIGVPDLEQTKCMRFNLDAPVWVSKQRILCTLNQTLKDVLNYGLFQPAYNG
RVGKFLDEERLLREYPTPPDTPIPYLEFRYKKRVYIQSHIEEKQLAKLHTKANLKKFMEY
IQYYHAEKIGKMLDKGLDPNFHDPDTGECPLTLAAQLESTPDIIKLLKSGGAHLDFRTRD
GLTALHKAVRCRNHAALITLLDLGASPDYKDSRGLTPLYHSSMVGGDPYCCELILHDHAN
VGCMDENGWQEIHQACRYGHVQHLEHLLFYGADMSTQNASGNTALHICALYNQESCARVL
LFRGANKEVKNYNSQSAFQVAIIAGNFELAEIIKNHKEADVVPFRETPSYTNRRRTGGSG
LSSPRTLLRSTSDNNINNLPSRTSHSPVPSLRSLPPQLLAHMQEAAEGGQQSTASSRSSH
SRSPSLQCVQEESDANTPILRRQTKARLSPSTVGAEPNIIPAAVHRGPKRKLYSAVPGRT
FIVVKPYQPQGEGEILLHRGERVKEVQSSSKVLSIGEGGFWEGTVKGRTGWFAAECVEEV
QMRQYNTRQETREDRTKRLFRHYTVGSYDNFSSHSDYVIEEKTAVLQKKENEGYGFVLRG
AKAETPIEEFTPTPAFPALQYLESVDVEGVAWKAGLRTGDFLIEVNNVNVVKVGHKQVVS
MIRQGGNNLLMKVVTVSRKPELEDGMRKKAPPPPKRAPSTTLTLRSKSMTAELEELASVR
RRKTEKLDEILAAADRSARTENVAADSRAATVKQRPTSRRITPAEISSLFERQGMPSKST
PPSVPEKPHISMPRGMSRTKSIGASEDDKLSVSAMEGRFSRSTSMQDTLREGLGIPPPPQ
IAPPPPPSSYLLDTGPPPPFSPPPPPGRTYDNVRSSFKPNTEAKIHGGQQAVTTAEVYEP
SRTPLPPVERQKRARSMIILQDPSYYPIEPTDIPWPSPSPIPQEKSKRKAKVVDNPYANV
GQFNVGLFAPTKPLRKKSPLVKQFQVEDAIERASAAGSSVAGKELLARRIAQHSGKEYGQ
QQRQGISKAQEDGHDLTSPFSVAIAGAVRDREKRLEEKRKSTVFLSVGAIESDTAPNIPA
LQQSRSVDERLLSSSDRSLRSPIPSPVPSTRPPASTPVTFIHPLTGKPLDPNSPLALALA
ARQRALVAETQHHRAAGSNESIKAQERNAPLYMEDHSKEAKKAEIEGLTSPPFSPEDKAG
YSPTSGVPVTEKHQWGTPTILRKEIETRPGQIEKPEREDKRVEEKKSMLINIVDTSQQKT
AGLLMVHATSNGQESELQESPTTALKPSSPQPQPSPTEKKASQPPSAVSEPPPPTTEAPG
KTQTQGSSDEDVEPFAISLPPLLSSSDEETREELAKIGLVPPPDEFANGIFIRAEAVKTA
SHPSRPPTAAPSTTGISPSGKPSNAPPSETSVDSGVEEIDTRSSSDHHLETTSTISTVSS
MSTLSSESGEPLDTYTSFADGQTFILEKPPVPPKPKLKSQLNKGPVTFRDPLLKQTSDSE
LVAQHQPSALPPGVGRSRYLIQRKSKLWGDAVEPRPIQMVEGSKPSVISELSSRLQQLSK
DTHSLGDEPSTASLEIGKRSPVVTARITSSLRRVSKLYFSVV
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggttagtgcacagaccatgcctctcagtccgaccgccaggaaacatgaggag
gagcagcagcagaacacttgcaactgcagcgagagcgaagaggagagtttcagcagaggg
gacaccatctaccacaccatcaggacgggtacagcagccaaagccgccaaccaaatggac
aaccccgcgcccagcactgtagtcattcgcattggggtacctgacctggagcagacgaaa
tgtatgaggttcaaccttgatgctcccgtgtgggtgtctaagcaacggattctgtgcact
ctcaaccagacgctgaaggatgtactaaactatgggctctttcaaccagcttacaacggg
agggttgggaagtttctggatgaagaacgtctgcttcgagaatacccaacgccccctgat
acacccataccatacctcgagttccggtataagaaacgcgtgtacatccagagtcatata
gaagagaaacaactggccaagctgcacacaaaggcgaatctcaagaagttcatggaatac
atccagtactatcatgctgagaagatcggtaagatgctggacaaaggattggatcctaac
ttccatgatccagacacaggagaatgtcctctgacattggctgcacagctggagagcaca
cctgacatcatcaagttgctgaaaagcgggggagctcatttggacttcaggacccgggat
ggactaacagctttacacaaggccgtgcgatgtcggaaccatgctgcactaataaccctg
ttggatttgggcgcttctccagactacaaggacagccgggggttaacgcctttgtatcac
agttcaatggtgggaggtgacccttattgctgtgaactgattctgcatgaccatgctaat
gttggctgcatggatgagaacggatggcaagaaatccatcaggcctgtcggtatggacat
gtgcaacatctggagcacttgctattttacggagcagacatgagcacgcagaatgcctca
gggaacaccgctctgcacatctgtgcactctataatcaggagagctgtgcaagggtcctt
ttattccgaggagcgaacaaagaagttaagaattacaacagccagtctgcattccaggtt
gccattatagctgggaactttgaactggccgaaattatcaagaatcacaaggaagccgat
gttgtgcctttcagagagaccccaagctacaccaacaggcgacgaactggcggaagtggc
ctctcatccccgcgcactctgctgcgatccaccagtgacaacaatatcaacaacctccca
agtcgtacctcccactcgcccgttccgtccctcaggagtctgccaccgcagttactggcg
cacatgcaggaggctgccgaaggaggccagcagagcacggcaagctcacggagctcgcac
agccgatcgccctcgttgcagtgcgtccaggaggagagtgatgctaacacccctattctc
aggaggcagactaaagccaggctcagcccgagtaccgtgggcgctgagccgaatatcatc
ccagctgccgtgcacagaggacccaagcgcaaactgtacagtgcggttcccggacggacc
ttcatcgtggtgaagccctatcagccccagggggagggggagatcctgctgcaccgaggg
gagcgagtcaaagaggttcagtccagtagtaaagtactgagcattggtgagggaggattc
tgggaagggacggtgaaaggtcggactggctggtttgctgcagaatgtgtggaggaagta
caaatgagacagtacaacacacggcaagaaacacgtgaagaccggacaaagagactcttt
aggcattacacagttggatcctatgataacttttcatctcacagtgattatgtcatcgag
gagaagacagcagtgcttcagaagaaggagaacgagggatatggctttgtcctccgagga
gcaaaagcggagactccaattgaagagttcacccccacgccagcgttcccagctctgcaa
tacctggaatctgtggatgtggagggagtggcatggaaggctgggctcaggacaggagat
ttcttgattgaggtaaacaatgtcaacgtggtaaaggttggacacaagcaggtggtctcc
atgatccgacagggagggaataacttgctgatgaaagtggtgacagtcagccgaaagcca
gaactggaggacggaatgaggaaaaaagccccgccgcccccgaaaagagcgccaagtacc
acactgactctccgctccaaatccatgactgctgaactcgaggagctagcctctgtacgc
agaaggaaaacggaaaaattggatgagatccttgcagcagctgatcgctcagcccggacg
gagaatgtggcagcagactcccgagctgcgacggtcaaacagcggcctacaagcaggcgt
atcacgccagcagagatcagttcactatttgagcgtcaaggcatgccttcaaagtcaacg
ccaccttctgtaccagagaaaccgcacatctcaatgcctagaggaatgtcaaggacaaaa
tctataggagcctctgaggacgataaactgtccgtctcagccatggagggaaggttttca
cgcagcacgtccatgcaagacactcttcgagaaggactgggtatacccccacctcctcag
atagcccctcccccgccaccctcctcatatcttttagacacaggccctcctccacctttc
tccccacccccacccccaggacgaacttatgacaatgtgcgttccagctttaagcccaac
accgaagcgaaaatacatggggggcagcaggcggtgacgacagcggaggtctatgagcca
agtcggactcctctgcctccagtagaaaggcagaaaagagccaggtcaatgataatcttg
caggatccatcttactatcccatagaaccaacagacatcccctggcccagcccctcacca
atccctcaagagaaaagcaaacggaaggctaaggtggtcgacaatccatacgcaaacgtg
ggccagttcaatgtgggcctgtttgccccaacaaagccacttcgtaagaaaagccctctg
gtcaagcagttccaggttgaagacgcgatagagagagcatcagcagctggttcctctgtg
gctggcaaggagttattagccaggaggatagcgcaacactctggaaaagagtatgggcag
cagcagagacagggaatcagcaaagcgcaggaggacgggcacgatctgaccagccctttt
tctgtcgccattgcaggagcagtacgggaccgagaaaaaaggttggaagagaagaggaaa
tcaacagtcttcctttctgtaggtgccattgaaagcgacacagcacccaacatcccagct
ctgcaacagtccaggtcagttgacgagagactactgagtagcagtgacaggtctctccga
tcgccaatcccttcacctgtcccttccacaagaccaccagcaagcacacctgtgactttt
atacatcccctcacagggaagccgctggaccccaactcaccactggcacttgcgctggcc
gcaaggcagcgggcactggtcgccgaaacgcagcatcaccgggcggctggaagcaatgaa
tccataaaagctcaggagagaaatgcccctctgtacatggaggaccacagcaaagaggca
aagaaagcagaaatcgagggcctcacatcgcctcccttctctccagaggacaaagcaggc
tatagtccaacatctggggtaccagtaactgaaaaacaccagtggggaactcctaccatt
ttgaggaaagaaatagaaactagaccagggcagatagaaaagccagagcgagaagataaa
agagtggaagagaaaaagagtatgcttataaacatagtggatacatcacagcagaaaaca
gcaggcctactgatggtccacgcaacaagtaatggccaagagtcagaacttcaagaatct
ccaacaactgccttgaagccatcatcaccacagcctcaaccgtcccccaccgagaaaaaa
gcttctcagccgcccagtgctgtttctgagcctcctccgccaactactgaagcacctggg
aaaacccaaactcaaggaagctctgatgaagatgtggagccatttgccatttctctccct
ccactgctgtcctccagcgacgaggaaacaagagaggaacttgcaaagattggtcttgtg
ccacctcctgatgaattcgcaaatggcatcttcatccgagccgaggctgtaaaaactgcc
agccatcccagtagacctccaactgcagcaccttcaactactggcatttcaccctcaggg
aagccttcaaatgccccaccttcagaaacaagcgtggactcgggtgtagaagaaatagac
acgagaagcagtagcgatcaccacctggaaaccacgagcacgatttcgaccgtctccagc
atgtccacattgtcgtcagagagtggagagcccttggacacatacacatcatttgctgat
ggacagaccttcatactcgagaagcctccagtgcctccaaagccaaagctaaagtcccaa
ctcaacaaagggccagtcacattcagggaccctctcttgaagcagacctcagacagtgag
cttgttgcccaacaccaaccgtccgcgctgccccccggcgtaggacggtctcgctacctc
atacagagaaagtccaagttgtggggggatgccgttgagcccaggcccattcagatggtt
gagggcagcaaacccagtgtaataagcgagctgagctccaggctgcagcaattgtctaag
gatactcactcactcggggacgagccatcaacagcctctctagaaataggaaagaggtca
cctgttgtcactgcacgaatcacctcgagcctcaggagggtgagcaaattgtacttttca
gtagtttag
DBGET
integrated database retrieval system
