Scyliorhinus canicula (smaller spotted catshark): 119973555
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Entry
119973555 CDS
T11175
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3 isoform X1
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119973555 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scau03021
]
119973555 (taf3)
Transcription machinery [BR:
scau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119973555 (taf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_UBR7-like
PHD_Pygo
PHD_2
Motif
Other DBs
NCBI-GeneID:
119973555
NCBI-ProteinID:
XP_038667806
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All DBs
Position
11:complement(161285112..161485769)
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AA seq
923 aa
AA seq
DB search
MSDSYGRALLRVAVAQICQALGWDSVQLTACDILTDVLNRYIEQLTRGCHRYSELYGRTD
PVLDDLGQAFKLMGISLSELEDYIHNLEPIGFAHQIPAFPVSKNNVLQFPQPGTKSLDEE
KEYIPEYMPPLISSQEEEEEEQVPTDGGTSAEAMQVPLEEEEEDMEEEEAVNDENFLGKR
PLESPDSIDLPIAKRARTAGCKMESPDGILEPREPLSMINSQRVPPVLSPVEPPDHSGPI
PLSPEPPMLAPIPKPSQLSTPKSSDSKVLTSKVKSKVSSSPIHKNKSPKGSQLALSGSPI
RSPKASLKSDKKSPMRTKSPKSPKAPATVSQSTTKNETPSQTPLLVCNLGPEKLGKENIH
LKQPHTSTELEKLDVLDTSPNKLAVPDKSIDDSIDAVIARACAERDPDPFEFSSGSESES
EIFTSPRRLTISETSTPRMLSLSSSFSRGSATPVSSSGPTTSTNVSWTLDDSINEVVRKA
SLGTPPSVPPSMPDLSSPSASPPTPEPLLKLYEERTKHASSSDVKKKLKKEIKMKIKKKE
KERLKDKDRDKKEKGKDKEKSKDKEKEANKESKIFFREFGKEHDKDPFKFRIKDFNESDV
KLKHKDGSFKKDKEKHKEKKKDKEKGKKDKEKNKDKDKHKAKVPSTGLGFIPKEVPLPLF
STPSSIKTQCALPAVSPMVPERLFEEKSKEKDKKKDKKEKKKKKDKDKERMKEKEKKEKE
KKEKEKEKDKHKNEKVKTEVILPAPSPVIPRLTLRVGAGQDKIVISKVVPATEAKPSPPA
GHPKTPPPPSPAPTPIHIAPPLTPAALPLPTAAPSPACALPAASLAASAGAGTSKTPVRS
VVTETVSTYVIRDEWGNQIWICPGCNKADDGSPMIGCDDCDDWYHWPCVGISAAPPDEVQ
WFCPKCITKKKEKKHKRKKSRAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagttacgggcgggccctgctgcgggtggcggtggctcagatctgccaggcc
ctgggctgggactcggtgcagctcaccgcctgcgacatcctcaccgatgtgctcaacagg
tacatcgagcagctgacccgcggctgccatcgctacagtgagctgtatggccgcacagat
cctgttttggatgatttgggacaggcctttaaattaatgggaatcagcctttcagaactt
gaagactatattcacaacctcgaacccattggatttgcacaccaaatcccagcatttcct
gtcagcaaaaacaatgtgcttcagttcccacagcctggtaccaagagtcttgatgaggag
aaggagtatattccagaatacatgccaccactcatctcatcacaagaagaggaagaggag
gagcaggttcccactgatggaggtacatcagcagaagctatgcaggttccccttgaagag
gaagaagaggatatggaagaggaagaggctgttaatgatgaaaacttcttgggcaagaga
ccacttgaaagccctgactctattgacttaccaattgcaaagcgagctagaacagctggc
tgtaaaatggagagcccggatggtatcttagaaccaagggaacccttgagtatgatcaat
tctcaaagggtgcctcctgttttatctccagttgaaccaccagatcattctggaccaatt
cctctttcacctgagcctccgatgcttgcacctataccgaaaccatcacaactttcaacc
cccaaatcttcagattcaaaagtgctcacatctaaagtcaaatctaaagtctcctcctca
ccgatacataaaaacaaatcccctaaaggatctcagttggcactttcaggaagtcccatt
cgttctccaaaagcttcattaaagtcagacaaaaaatcgcctatgcgtacaaaaagtccc
aaaagtccgaaagcaccagcaactgtttctcaatccactaccaagaatgaaacgccaagc
caaacacctttgttggtgtgtaatttagggcctgaaaaacttgggaaagaaaatattcac
ttaaagcagccacatacgtcaactgaattggagaaactagatgttttggatacatcacca
aataaattggcagtgcctgataagagcattgatgactctattgacgctgttatagctcgt
gcttgtgctgagcgtgacccagacccctttgagttttcttccgggtccgaatcagaaagt
gaaatcttcactagtcccagaagactcactatttcagaaacatcaaccccacggatgctt
tccctatcgagcagctttagcaggggtagtgcaaccccagtatcatcatctgggccaaca
acgagcacaaacgtgtcatggactttggatgattccattaatgaggttgtcaggaaggca
agcttaggtacacctccttctgtacctccatccatgcctgacctgtcctccccttctgct
tccccaccaactccagaacccctccttaagctctatgaagaacgcacaaagcatgcatct
tcatctgatgtgaagaaaaagctgaagaaagagattaagatgaaaatcaagaagaaggaa
aaagaaaggctgaaagataaggacagagacaaaaaggaaaagggcaaagataaagagaaa
agcaaggataaagaaaaggaagccaacaaagagtccaagatttttttcagagaatttggt
aaagaacacgataaagatccatttaaatttagaattaaagacttcaatgagagtgatgta
aagttaaagcataaagatgggagctttaaaaaggacaaagaaaagcataaagaaaagaaa
aaagataaagaaaaggggaaaaaggataaagaaaagaataaagacaaggataaacataaa
gctaaggtcccttcaacaggacttgggtttattccaaaagaggttccgttgcccttgttc
agcaccccaagcagtatcaagactcagtgtgctttgccagcagtgtctcctatggttcca
gaaagactatttgaggaaaagtcgaaagagaaggacaagaaaaaagacaaaaaggagaaa
aagaaaaagaaagataaggacaaggaaaggatgaaggaaaaggagaaaaaggagaaagaa
aagaaggaaaaggagaaagaaaaagataagcataaaaatgaaaaagtaaaaactgaagtc
attttaccagctccttcccctgttattccaagactaaccctgagggtcggtgctggccag
gacaagatagtcatcagtaaggtggtcccagccacagaggcaaaaccatcgccacctgcg
ggtcacccaaagactccaccaccaccatctccagccccaactccaattcatattgcacca
ccccttacgccagctgctcttcctctccccacagcagctccatctccagcttgtgctctt
cctgctgcatctcttgcagcttctgctggagcaggaacctctaagacgccagtcagaagt
gtagtcacagagactgtcagtacatacgtgattcgggacgaatggggaaatcaaatctgg
atctgtcctggctgcaacaaggcagacgatggcagcccaatgattggctgcgatgactgt
gatgattggtatcattggccttgcgttgggatttctgcagcaccaccagatgaagtgcaa
tggttttgcccgaagtgcatcactaagaagaaagagaagaaacacaagagaaagaaatca
agagctcattga
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