KEGG   Scyliorhinus canicula (smaller spotted catshark): 119973648
Entry
119973648         CDS       T11175                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03050  Proteasome
scau03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    119973648 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    119973648 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scau03019]
    119973648 (sem1)
   04131 Membrane trafficking [BR:scau04131]
    119973648 (sem1)
   03051 Proteasome [BR:scau03051]
    119973648 (sem1)
   03400 DNA repair and recombination proteins [BR:scau03400]
    119973648 (sem1)
Messenger RNA biogenesis [BR:scau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     119973648 (sem1)
Membrane trafficking [BR:scau04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    119973648 (sem1)
Proteasome [BR:scau03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     119973648 (sem1)
DNA repair and recombination proteins [BR:scau03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     119973648 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 119973648
NCBI-ProteinID: XP_038667959
LinkDB
Position
11:complement(61155647..61156005)
AA seq 70 aa
MSEKKAPADLGLLEEDDEFEEFPAEGWTGLDEDEDAHVWEDNWDNENVEDDFSNQLRAEL
EKFGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcggagaagaaggcacctgcagacctgggcttgttggaagaggacgatgagttcgag
gagtttccggcagaaggctggactgggttagatgaagatgaagacgcccatgtctgggaa
gacaactgggacaatgaaaatgtagaggacgatttctctaaccagttgagagctgaatta
gaaaaatttggatacaagatggaaacttcctag

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