KEGG   Scyliorhinus canicula (smaller spotted catshark): 119973729
Entry
119973729         CDS       T11175                                 
Symbol
rab7a
Name
(RefSeq) ras-related protein Rab-7a
  KO
K07897  Ras-related protein Rab-7A
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04137  Mitophagy - animal
scau04140  Autophagy - animal
scau04142  Lysosome biogenesis
scau04144  Endocytosis
scau04145  Phagosome
scau04148  Efferocytosis
scau05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:scau00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    119973729 (rab7a)
   04145 Phagosome
    119973729 (rab7a)
   04142 Lysosome biogenesis
    119973729 (rab7a)
   04140 Autophagy - animal
    119973729 (rab7a)
   04137 Mitophagy - animal
    119973729 (rab7a)
   04148 Efferocytosis
    119973729 (rab7a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119973729 (rab7a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scau04131]
    119973729 (rab7a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scau04147]
    119973729 (rab7a)
   04031 GTP-binding proteins [BR:scau04031]
    119973729 (rab7a)
Membrane trafficking [BR:scau04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    119973729 (rab7a)
Exosome [BR:scau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119973729 (rab7a)
  Exosomal proteins of other body fluids (saliva and urine)
   119973729 (rab7a)
  Exosomal proteins of colorectal cancer cells
   119973729 (rab7a)
  Exosomal proteins of bladder cancer cells
   119973729 (rab7a)
GTP-binding proteins [BR:scau04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    119973729 (rab7a)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 Septin AAA_16 AAA_7 NTPase_1 AAA_22 AAA_5 G-alpha AAA_24 ATPase_2 NB-ARC AAA_14 NACHT ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 119973729
NCBI-ProteinID: XP_038668064
LinkDB
Position
11:complement(4958747..5002078)
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTAKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDKNDRAKTSAESCSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacgtcaaggaagaaggttttgctgaaagtcatcatcctgggagattcaggggtaggg
aaaacctcattgatgaaccagtatgtaaacaaaaagttcagtaaccagtacaaggcaaca
ataggggcagactttctgacaaaggaggtgatggtggatgatcgattggtgacgatgcag
atttgggatacagcagggcaagagcggtttcagtcgttgggagtggcattctacagagga
gctgactgctgtgtgctggtctttgatgtaacggctcccaacacgttcaaaacactagat
agctggagggatgagtttcttattcaagctagcccacgagatccagaaaacttcccattt
gttgtccttgggaacaagatcgatttggaaaacagacaagtcactgcaaaaagagcacag
gcatggtgtcagagcaaaaataatatcccatattttgaaaccagtgccaaggaggcaata
aatgtggaacaggcttttcaaacaattgcacggaatgcacttaaacaggaaactgaagtg
gaactctacaacgaattcccagaaccaatcaaactagacaagaatgaccgggcgaagact
tcagcggagagttgcagctgctga

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