Scyliorhinus canicula (smaller spotted catshark): 119973966
Help
Entry
119973966 CDS
T11175
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03320
PPAR signaling pathway
scau04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119973966 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
119973966 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119973966 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
scau03310
]
119973966 (pparg)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119973966 (pparg)
Nuclear receptors [BR:
scau03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
119973966 (pparg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119973966
NCBI-ProteinID:
XP_038668597
LinkDB
All DBs
Position
11:29908916..30071854
Genome browser
AA seq
476 aa
AA seq
DB search
MVDTQLPLWPINFALGTMDLSEFANHSHSFDVKPFATVDFSTVSPVNYEDHASTSFRIDE
NSSDYKYDERYLDYQSTIKVEPSSLNEKSGKEPSFSKLQEDSSNSALSIECRVCGDKASG
FHYGVHACEGCKGFFRRTIRLKLMYDRCDLNCRIQKKNRNKCQYCRFQKCLAVGMSHNAI
RFGRMPQAEKEKLLAEISSDADQLNPEFADLLSLAKHMFESYNKSFPITKAKSRAIMAGK
TGDISPFVIYDMNSLKAGEERIKFKQTSLQEQNTEVEIRIFQRCQFRSVEAVREITEFAK
SIPGFINLDLNDQVTLLKYGVHEVIFSMLASLMNKDGLLIAAGQGFMTREFLKSLRKPFC
DIMEPKFEFAMKFNSLGLNDCDIAIFIAVVILSGDRPGLLNVKPIEELQDSILQALALQL
KINHPDSPQLFAKLLQKMTDLRQIVTEHVQLLHTIRKTEAEMSLHPLLQEIYKDLY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtagatacacaactgcctttatggcccatcaattttgccttgggcacaatggacctg
tcggaatttgccaaccattcacattccttcgatgtaaagccatttgctacagtggacttt
tccactgtttctccagttaattatgaggatcatgcttcaacctctttcagaattgatgag
aattcttcagactataaatatgatgaaagatatctggattatcaaagtactattaaagtt
gaaccatcttccttaaatgaaaaatccggaaaagaaccttcattttcaaagttacaagaa
gattcatcaaattcagccctgtctattgaatgtagagtatgtggagataaggcctcaggt
ttccattatggggtccatgcatgtgaaggatgtaagggatttttccggcgaacaatcagg
ttgaagttgatgtatgacaggtgtgacctaaactgcaggattcagaagaagaacaggaat
aaatgtcagtactgcaggtttcagaaatgcctggctgtcggcatgtcgcataatgcaatt
agatttggcagaatgccacaagctgaaaaggagaaactcctagccgaaatctccagcgat
gcagaccaactcaaccccgagtttgctgatctcctttctcttgcaaaacacatgtttgag
tcgtacaataagtcttttcctattacaaaagctaaatctcgagcaattatggcaggaaag
acgggagacatatcgccatttgttatttatgacatgaattccttaaaggcaggagaggag
cgcatcaaattcaaacaaacatcgctgcaagaacagaacacagaggtagaaatacgaatt
tttcaacgctgccaattccgttcagtggaggctgtcagggaaatcactgaatttgccaaa
tctatccccggattcataaatcttgacctaaatgaccaagttactctccttaaatacggt
gtccatgaggtcatattcagtatgctggcctccctgatgaataaagatggacttctgatt
gctgcaggccaagggtttatgactcgtgaatttttaaagagcctgaggaaacccttttgt
gacatcatggagcccaaatttgaatttgccatgaagttcaatagcttgggcctgaatgac
tgtgacattgcaatatttattgccgttgtcatactcagtggagatcgacctggattgcta
aatgttaaaccaattgaagaactgcaggacagcattctacaagcacttgcccttcaactt
aagataaaccacccagattcgccacaattatttgcaaaactacttcaaaaaatgacggat
ctaagacagattgtaactgagcatgtgcagcttctgcacactatcaggaaaacagaggca
gaaatgagtcttcatccgctcctgcaagagatatacaaggacttgtattag
DBGET
integrated database retrieval system
