Scyliorhinus canicula (smaller spotted catshark): 119974009
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Entry
119974009 CDS
T11175
Symbol
cacna2d3a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04260
Cardiac muscle contraction
scau04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119974009 (cacna2d3a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119974009 (cacna2d3a)
04261 Adrenergic signaling in cardiomyocytes
119974009 (cacna2d3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119974009 (cacna2d3a)
Ion channels [BR:
scau04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119974009 (cacna2d3a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA_3
VWA
VWA_2
dCache_2
YnfE
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
119974009
NCBI-ProteinID:
XP_038668703
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Position
11:37559130..38652285
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AA seq
1102 aa
AA seq
DB search
MQRYMHILQAFCSFSVIVWASFSIIRAQAKESQQQIPLNVVKLWASAFGGEIKSISAKYS
GSQFLQKKYKEHEKTVTVQEIDGLQLVKKLAKDMERMFHNKAEAIRRLVEAAENAHLEHE
YNSDLEYEYFNAVLINEKDENGNFVELGKEFILEPNEHFNNLPVNISLSDVQIPTNKYNK
DPAIVNGVSWSEALNKIFVDNFERDPSLLWQYFGSANGFFRQYPGVKWEPDENGVIAFDC
RNRKWYIQAATSPKDIIILVDVSGSMKGLRMTIAKQTVSSILDTFGDDDFFNIIAYNEEL
HYVEPCINDTLVQADRNNKEHFREHLDTLNAKGIGMLGFALTEAFTLLKQFNNTGHGSIC
SQAIMLVTDGAVDTYDTVFAKYNWPDRKVRIFAYLIGRETVFSENLKWMACANKGYFTQI
STLADVQENVMEYLHVLSRPKVIDQEHDIVWTEAYIDNTLPQAKKLAEGSDRVLMTTIAM
PVFSKKNETRTQGILLGVVGTDVPVKELMKVIPKYKLGIHGYAFAITNNGYVLAHPELRP
LYEEGKRRRKPNYKSVDLSELEWEDNDDILRNGMVNRKTGKFSMEVKKTVEKGKRVLVMT
NDYYYTDIKGTPFSLGVALSRGHGKYFLQGNVTLEEGLHDLDHPDLTLMEEWNYCNTDKH
PQYRNLFQLEAVKLFLTGKEPFIQCDKELIQEVLFDAVVTAPLEAYWTSLALNRSENADK
GVEVSFLGTRTGLSRINLFVGQEQRTNQDFLTAKDRESIFTADHFPLWYRKSAEQLPGTF
VYSIPFSTGAANKSNVVTASTTVQLLDNRKSPVVAAVGIQMKLEFFQKKFWTASRQCASL
DGRCTISCDDEIINCYLIDNNGFILVSENYDETGTFFGEVEGAVMNKLLMMGSFKRQRNK
DWDIHMRLRITLYDYQAMCRATVDNSDSAHSLLDPYYVFFAAIKWIMTELILFLVEFNLC
SWWNSDFTVKAQSPKQILQSCDTEYPAFVSERTIKETTGAIHCEGCHKSFVIQQIPSSNL
FMVVVDASCDCAIGPITMEPIEIMYNESLKCDHLRSQKIRRRPDSCHPFHAEENARECGG
ALGLGPCLAILLPPLLVVSSQR
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatatatgcatattttacaagctttctgtagcttttctgtaatcgtgtgggca
tctttcagcattatacgggcacaagcgaaagaatcacagcaacaaattcccctcaatgtg
gtgaaactatgggcttcggcctttggaggggaaatcaaatctatttcagccaaatattca
ggctcacaattcctgcagaagaaatataaagagcatgaaaaaacagtcactgttcaggaa
atagatggtctccagcttgtcaaaaaactggccaaggatatggaacgaatgtttcataat
aaagctgaagcaataagacgtctggttgaagccgctgaaaacgctcacttggaacatgaa
tataattccgatctggagtatgaatacttcaatgctgtattaataaatgaaaaagatgaa
aacggcaactttgtggaacttgggaaggaatttattttggaacccaatgaacatttcaat
aatttgccagtgaacatcagcttaagtgatgtccaaataccaaccaacaaatacaacaaa
gaccctgccatagtaaatggagtttcctggtctgaagcattaaacaaaatttttgttgac
aattttgaacgtgatccttcccttttatggcaatactttgggagtgccaatggattcttc
agacaatacccaggtgtaaaatgggagcccgatgaaaatggagtaattgcatttgactgc
agaaaccgcaaatggtacattcaggccgccacttcacccaaagacattatcattttagtt
gatgtcagtggaagtatgaaagggcttcgcatgacaatagccaaacaaaccgtttcttcc
atcctggacacatttggagatgatgactttttcaacattattgcatacaatgaagagctt
cattatgtggaaccgtgcataaatgacactttagtgcaggcagacagaaacaacaaagag
catttcagagagcaccttgataccctgaatgcaaaaggaatcggaatgctaggctttgct
ttgactgaagctttcacccttctgaagcagtttaacaacacaggtcatggaagcatttgc
agccaagctattatgctggttactgatggagccgtggatacttatgatacagtattcgca
aaatacaactggccagatcgaaaggtacgcatttttgcctatttgatcggacgtgagact
gtattttctgaaaatctgaaatggatggcctgtgcgaataaaggatatttcactcagatt
tccactctagctgatgtacaagaaaacgtgatggagtaccttcatgttctgagccggccg
aaggtcattgaccaggaacatgatattgtgtggactgaggcatacattgacaacactctc
ccacaggctaaaaagcttgctgaaggttctgaccgagttctaatgacgacaattgcaatg
ccagtatttagcaagaaaaacgaaacacgtactcaaggcattcttctgggtgtggtcggc
acagatgttccagtaaaagagcttatgaaggttattccaaagtataagctcggcattcat
ggatacgcttttgcaatcaccaacaatggttacgtcctggcacatccagaactgagacca
ctgtatgaagaaggaaaaagaaggagaaaacccaattacaagagtgttgacctgtctgaa
ctggaatgggaagacaatgatgacattctgcgcaatggtatggtaaatcggaaaacagga
aaattttcaatggaagtgaaaaagactgtggagaaagggaagcgagtcttagtgatgaca
aatgattactattatacagacatcaaaggcactccattcagtctaggtgtggctttatcc
agagggcatgggaagtacttcctccaaggaaatgttacgctggaagaaggtttgcatgac
ctggatcaccctgatttaacactgatggaagaatggaactactgtaatactgacaaacat
cctcaatatcgaaacctctttcagctcgaagctgtcaaactatttctcacgggaaaagag
ccatttatacagtgtgacaaagaattgatccaagaagtactttttgatgctgtggtgaca
gcaccactagaagcttactggaccagtttagctctaaacagatcagaaaacgctgacaag
ggtgttgaagtttctttcctgggaacacgcacgggcctcagtcgtatcaatttgtttgtc
ggacaagaacaacgtactaatcaagatttcttgactgcaaaggacagggaaagtattttc
actgccgatcatttccctctgtggtacaggaaatcagcggaacaacttccaggcactttt
gtctactccatcccatttagtacaggggctgcaaataaaagtaatgttgtgacagcgagc
acaaccgtgcagcttttggacaacagaaaatcaccagtggttgcagctgtaggtattcag
atgaaattggagtttttccaaaagaagttctggactgcaagccgacagtgtgcttcactt
gatggaagatgcacaataagctgtgacgatgagataatcaactgctacctcatagataac
aatggatttattttggtatcggaaaattatgatgagactggaactttcttcggtgaagtg
gaaggagctgttatgaataaactattaatgatgggttcatttaaacgacagcgaaataaa
gattgggacatacacatgcgattaagaataacactttatgactaccaagccatgtgtaga
gcaaccgtagacaatagcgacagtgcacatagcttactggatccttattatgtcttcttt
gccgcaataaagtggattatgacggaacttatcttatttctcgtggaattcaatctttgc
agttggtggaattctgacttcacagtgaaagcacagagtccgaagcagattcttcagtca
tgcgacactgaatatccagcctttgtgtctgaacgaacgattaaagaaactacaggagca
atccattgtgaaggctgccataagtcatttgtcatccaacagattccaagcagtaacctc
tttatggtggttgttgatgccagctgtgattgcgctataggaccaattacaatggagcct
atagaaataatgtataatgaatcactgaaatgtgatcatctcaggtctcagaaaatcaga
agacgtccggactcctgtcatccattccatgctgaagaaaatgcgagagaatgtggcggt
gccctgggcctgggaccttgccttgcgattctgctgccgcccctcctcgttgtttcatct
cagaggtga
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