Scyliorhinus canicula (smaller spotted catshark): 119974278
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Entry
119974278 CDS
T11175
Name
(RefSeq) guanylate-binding protein 4-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119974278
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Gene cluster
GFIT
Motif
Pfam:
GBP_C
GBP
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
119974278
NCBI-ProteinID:
XP_038668978
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All DBs
Position
12:71568697..71592474
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AA seq
535 aa
AA seq
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MGDILWVAEQYACFLQGNQKNDSWIFALAVLLSSSLVYNSMGTIDQYALEKLYFVTELTE
LIKVKASADFHEDDEIEYLKIFPTFVWCVRDFSLELKIEGQVVNQDGYLEHALLLKKGNS
KKVMEYNLPRQCIRNYFPKRKCFVFVRPVSRDLHTVEHVPEQMLDQSFVQECQKTVIQQR
AAEFCKYIHETSQPKCLQGGHIITGRMLGMLASSYVSAIATGAVPCLDDAVTSMARMENA
VAVRLASDHYRQQMEQQVVNMPMETRELSDIHGNCEKEALGVFMQRSFKDQHQEYQKQVV
SDLAHQYLAVCQKNQQLSVEKCQVLLQSLSTEMHRKLQEGVYTLPGGYRLYVTDRNALVS
EYHSTPGKGIQAEVVLAEFLKRKQIEADTILQAEKKLSEAEKLLASEADKATLMEQVNKA
REEELFQLKQLREDERRTNEENLRQMKVKIVEEREEMLKEQERALESLMAEQKAVLEKGF
QEKAELMEEQIQQLKHQEQQTWAGGLVDIIDFMGILRSIFNAARAFATSFIGEPD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggggacatcttgtgggttgctgaacaatatgcttgctttcttcagggtaatcagaag
aacgacagctggatctttgctcttgctgtacttctcagcagttcccttgtctacaacagc
atgggtacaatcgatcaatatgccttggagaaactgtattttgtcaccgagctcactgaa
ctgatcaaagttaaagcgagtgctgatttccatgaggacgatgagatcgaatatttgaag
attttcccgacgtttgtctggtgtgtccgggacttcagtctggagctgaaaatcgagggc
caagtggtgaatcaggatggatatttggaacacgctctgctgctgaagaaagggaattcc
aaaaaggttatggaatacaacttgccccggcagtgcattcgaaactactttcccaagcgg
aaatgctttgtcttcgtccgtccagtctcccgcgatctgcacacggtggagcatgtccca
gagcagatgctggaccagagcttcgtgcaggaatgccagaaaaccgtgatccagcagagg
gcagcagagttctgcaagtacatacatgaaacatcgcaacccaaatgtctccagggaggc
catatcattactggcagaatgttgggtatgttagccagcagttacgtctctgcgatcgcc
accggggcagtcccttgcctggacgacgccgttacctcgatggccaggatggaaaatgct
gtcgctgtaagactggcctctgatcactacaggcagcagatggagcaacaagtggtcaac
atgccgatggaaacgagggagctttcagacatacacggcaactgtgagaaagaggcgctc
ggagtcttcatgcagcgttcattcaaagaccagcatcaagagtatcaaaaacaagtggtg
tctgatctcgcacatcagtatctagctgtctgccagaagaatcaacagctgtctgtggag
aaatgccaagttctgcttcagagcctttctacagaaatgcaccgcaaattgcaggaaggg
gtttacactctacccggtggttatcggctgtacgtcacggacaggaatgcgctggtgtcc
gaataccactccacacctggaaagggaatccaggcggaagtggtccttgcagagtttctg
aagaggaagcaaatagaggcggacaccatactgcaagcagagaagaagctgtcagaagcc
gagaaattgttggccagtgaagcagataaggcaacattgatggaacaagtgaacaaggct
cgggaagaggaactcttccagctgaagcaactgagggaggatgagagaagaaccaatgag
gaaaatcttcgccagatgaaggtgaaaatcgtggaggagcgagaggaaatgttaaaggag
caggagcgggccttggaaagcctgatggccgagcagaaggctgttttggaaaagggtttt
caggagaaagctgagcttatggaagagcaaattcaacagcttaagcatcaggagcagcag
acatgggcaggtggtcttgtggacatcatagatttcatgggcatcctccgctctatattc
aatgcagcaagagcttttgccaccagttttattggtgagcctgattaa
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