Scyliorhinus canicula (smaller spotted catshark): 119974282
Help
Entry
119974282 CDS
T11175
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
119974282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
DUF5339
Motif
Other DBs
NCBI-GeneID:
119974282
NCBI-ProteinID:
XP_038668982
LinkDB
All DBs
Position
12:complement(72342437..72426440)
Genome browser
AA seq
880 aa
AA seq
DB search
MWMWCLPHPQRDDQCLIILDVDGFETKEQEGDTTEIRISALALILSNIFIYNSKGTINEE
ALDKLQFITKISNYVEIRPNTGEERKCPEFLWCVRDSELNLWMDGFRLIADDYLLSILTI
GQDTDGCSVSRCLKNLFHRQKCFEFSHPCPEADGTRMDEVLEGKLDREFQMQAERLRNYV
LNSELESIMGGHNVNGQMLARLIETCVSSMCKGQRIILENLRDIVLCEKPTVELDKVTAE
KGVKTTKVERIVPLTKPSAGSVMYDMQEPVCLIENSASGELRVNQEAVNILSEISQPVVA
VAIVGLYRTGKSYLMNKLAGKLRGFSLGSTIQSETKGIWMMCVPHPLNHNHCLILLDTEG
LGDVEKGDEKNDSWIFALAVLLSSMLVYNSMGTIDQYAVAKLHYITELTELIKVKSAGGD
DESMQFARFFPAFVWSVRDFTLDLKLGSRIVTADEYLDNALKLKHGSNKKIQDYNLPREC
IRNYFPSLKCFVFDRPADKEVMKNMDRIPDSGLDPAFVKQAHSFLKYVYSTAQIKRLKGG
HIVTGRMLGSLALTYVDSIRSGKIPCLESTVHMLSEIENTAAVTMASKAYSEWMEEQVSL
PTETVEELSTIHNRCQSQALQLFMKQCFKDEGQRYQQEFMNSVAKIYADMCEKNMKKSLD
ISTAIMRDLGAAMQEKAKNGSYAKPGGYAVYVKDMDELVEGYRAKPGKGVQAEKILQDFL
ENKQQFSQHLRIFDESMSAREKELAAEREKAEVAEQERKGREEEQRAAQQLLEDQRRAME
ENMAQLREKLKQDQIKLHQEHDKVLKQRLEEQEKLQREGFQTRVKAMEKQIDSLKKQQKE
TESPAYLDRILDMATLMLPPQYKLIPVSVKLVKHLWTKFL
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgtggtgtctccctcaccctcagcgagatgatcagtgtctaattattctggat
gttgatggatttgaaacaaaggaacaggagggtgacaccaccgaaatcaggataagtgcc
ctcgctctgattctcagcaacatcttcatctataacagcaaaggcacgattaacgaggag
gccctggacaaactgcaattcatcaccaagatctcgaactatgttgagatacgtcctaat
accggtgaggagaggaaatgccctgagtttctctggtgtgttcgcgactctgagttgaat
ctgtggatggatggcttcagactgattgcagacgattacctgctatctattctgaccatt
gggcaagataccgatggctgttccgtcagtcgctgcctcaagaatctatttcacagacag
aagtgttttgaattctcccacccgtgcccagaggctgacggaacgagaatggacgaggtt
ctggaggggaagttggaccgagaattccagatgcaggcggaaagactgaggaactatgtt
ctcaacagcgagctggaaagcatcatgggaggccataacgttaatgggcagatgttggct
cgattgattgaaacctgtgtgagcagtatgtgcaagggtcaaaggattattctggagaat
ctccgtgacatcgtcctatgtgagaagccaactgtggagctggataaagtaactgcagaa
aagggagtgaagacaaccaaggtggaaaggattgtacccctcacaaagcccagtgcaggc
agtgtcatgtacgacatgcaggaacccgtgtgtttgattgagaacagcgcgtctggtgaa
ctacgggtcaaccaagaggctgtgaacatcttgtcggagatcagtcaaccggtggtggct
gtggccatagtggggttgtaccggaccggcaaatcctacctaatgaacaaactggccggg
aaactgagaggtttctcgctgggatccaccattcagtccgagaccaaagggatctggatg
atgtgtgtgcctcacccactcaatcacaaccactgcctcatattactggacactgaagga
ctgggggatgtggagaagggtgatgagaagaatgattcttggatctttgctcttgctgta
ttgctgagcagtatgttggtgtacaacagcatgggcaccattgatcagtatgcagtggcg
aagctgcattacataacagaactgaccgagctgatcaaggtgaaatcggcgggtggtgac
gatgaatccatgcagtttgcccgcttcttcccggcctttgtctggtccgttcgagacttc
accctggatctgaagttgggcagcaggattgtgacggcggatgaatacttggacaatgct
ctcaaactgaagcacggctccaataaaaaaattcaggactacaaccttcccagggaatgc
atcaggaattatttccccagtctcaagtgtttcgtgtttgacagaccagccgataaagag
gtgatgaaaaatatggaccggattccagattccggcctggatccagcctttgtgaaacag
gctcatagttttctgaagtatgtttacagcacagcgcagataaagagactgaaaggaggc
cacatagtcaccgggagaatgctgggcagcctggccctcacctatgtggactctatccgc
agcgggaagatcccgtgcctcgagagcacagtccacatgttgtcggagattgagaacacg
gctgcggtcaccatggcatccaaggcctactcagagtggatggaggaacaggtcagtctc
ccgacagaaactgtggaggaactatcaacgatccacaatcggtgtcaatcccaggccctt
cagctcttcatgaaacaatgcttcaaggatgaagggcagagatatcagcaggaatttatg
aattcagtggctaaaatttatgctgacatgtgtgaaaaaaacatgaagaaatccttggac
atctcgactgccatcatgagggatctgggagctgcaatgcaagaaaaggcgaagaatgga
tcatatgcaaagccgggaggctatgcggtgtatgtaaaggacatggatgagcttgttgag
ggataccgagccaaaccagggaagggagtccaggctgagaaaatccttcaagactttctg
gaaaataagcagcaattctcgcaacaccttcgaatttttgatgagagcatgtcggccagg
gagaaggagcttgcagctgaacgggaaaaggcggaagtggcagagcaagagaggaaaggg
agggaagaggagcaacgagctgcccagcagctgctggaggaccagaggcgggcgatggag
gagaacatggcccaactgcgagagaagctgaagcaggaccagatcaaattgcatcaggaa
cacgacaaggtcctgaaacaaagactcgaggaacaggagaagctgcaacgcgaaggattc
cagacccgtgtgaaggcaatggagaaacagatagactccctgaagaagcagcagaaagag
acggaatccccggcatatctggacagaattcttgatatggccactctgatgcttcctcct
cagtacaaactcatcccggtcagtgtcaaattagtcaaacatctgtggaccaaattctta
tga
DBGET
integrated database retrieval system
