Scyliorhinus canicula (smaller spotted catshark): 119974300
Help
Entry
119974300 CDS
T11175
Name
(RefSeq) glutamate receptor ionotropic, kainate 5-like
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04080
Neuroactive ligand-receptor interaction
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119974300
04082 Neuroactive ligand signaling
119974300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119974300
Ion channels [BR:
scau04040
]
Ligand-gated channels
Glutamate (ionotropic)
119974300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
SgrR_N
Motif
Other DBs
NCBI-GeneID:
119974300
NCBI-ProteinID:
XP_038669000
LinkDB
All DBs
Position
12:complement(96115535..96384119)
Genome browser
AA seq
546 aa
AA seq
DB search
MQLLPALLLLLVMSTKRSRQLLSTLRMAAILDDHTTCGRGERLALALAREKINSVIEVPA
KARVEVEIFELQQDSQYEATDMMCQILPKGVAAILGPSSSPASGSFISHICGEKEIPHIK
VGPEETPKLQYLRFASISLYPSNEDISLAVGSILRFSNCPSTSLVCAKAECLLRLEVLVR
QFLISKESLSIRMLDHSYDPTPLLKEIRDDKISTIIIDANASVSYLILKKAADLGMTSAY
YKYILTTMDFPVLQLSEIVDDHANIIGFSMLNPRHPFFLEFIRSLNMSWRENCDTAHFPG
AALPSALMFDAIHVVVNAVRQLNRSQEIGLRPLSCTTSQIWQHGTSLMNYLRTVSMGSAH
RQSQTFHMQRLTQGHTESRKTTSRKMMKGKEYQQIGSWHSNRGLIMDATFLDINVSETLI
NKTLIVTTILENPYVMRKHNFQELTENDRYEGFCVDMLKELGDILKFNFKIKLVEDGLYG
APESNGSWTGMVGELIQRKADLAVAAFTITAEREKVIDFSKPFMTIGISILYRMHMVRVI
SLHHYF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttctgccagcactgctgcttctgttagtgatgtctaccaaacgaagccgtcag
ctcctgtcaacattgcgcatggctgcaatcttggatgaccacaccacgtgcggcaggggt
gaaaggttagcactggcactcgcaagggaaaagatcaacagtgtcatcgaggtccccgca
aaagctcgtgtggaggtcgaaatctttgagctccagcaggatagtcagtacgaggcaaca
gatatgatgtgtcagattcttcccaagggagtggctgcaatcctgggtccgtcttcaagt
ccggcgtccggatcattcatcagccatatctgtggagagaaagagattcctcacattaag
gtcggtcctgaggagacgccgaagttacaatatctgagatttgcttcaatcagcctgtat
ccaagtaacgaagacataagtctggctgtgggcagcatcctaaggttctccaactgtccc
tccaccagcctggtctgtgccaaagccgagtgcctccttcgccttgaagtgttagtacgg
cagttcctcatttcgaaagagtctctctcgatacgaatgctggaccattcctatgacccc
actccactattgaaggaaatccgtgatgacaagatctccaccatcatcatcgatgctaat
gcttcagtgtcttacttaattctgaaaaaggctgctgatttgggaatgacctcagcgtac
tataagtacattctcaccacaatggatttccctgtgttgcagctcagtgagattgttgat
gaccatgcaaacatcattggcttctccatgttgaatcccaggcatcccttcttcctcgag
tttatccgtagccttaacatgtcgtggcgggaaaactgtgatactgctcatttccctgga
gctgcgcttccctctgcactgatgtttgatgcaatccatgttgtggtgaatgcagtccgg
cagctgaaccgcagccaggagattggtctgagacccctgtcatgcacaacctcacagatc
tggcagcacgggaccagcctgatgaactacctgcgcacagtgagtatgggcagtgcccac
agacagagtcaaacattccacatgcagagactgacacagggtcacactgaatccaggaaa
acaacatcaaggaaaatgatgaaaggaaaggagtaccagcaaattgggagctggcactca
aatcgaggcctgatcatggacgccactttcctcgatattaatgtctcggagacactcatc
aataaaacgctcatcgttaccactatcttggaaaatccgtacgtgatgaggaaacacaac
tttcaggaattgacggagaatgatcgatacgaggggttttgtgtcgatatgctgaaggag
ttaggcgacatcctaaagtttaactttaagatcaagctggtggaagacgggctgtatgga
gcccccgagtcgaatggttcatggactggaatggttggggaactcatacaaaggaaagct
gatcttgctgttgctgccttcacaataactgctgagagggagaaagttatcgatttctcc
aaacccttcatgacgatcgggattagcatcttgtaccgaatgcacatggtaagagtaatc
agtcttcatcactatttctag
DBGET
integrated database retrieval system
