Scyliorhinus canicula (smaller spotted catshark): 119974351
Help
Entry
119974351 CDS
T11175
Name
(RefSeq) pinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
scau04030
]
119974351
G protein-coupled receptors [BR:
scau04030
]
Rhodopsin family
Vision
Opsin
119974351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
TAS2R
6TM_PilS
Motif
Other DBs
NCBI-GeneID:
119974351
NCBI-ProteinID:
XP_038669050
LinkDB
All DBs
Position
12:complement(159755409..159779044)
Genome browser
AA seq
354 aa
AA seq
DB search
MGFSTVAIITHNTTIGTFDGPQWPHVAPKSTYMAVATLMGTVVILASFMNGMVMLVSIKY
KRLRSPLNYILVNLAIADLLVTFFGSTISFSNNVHGYFTLGESMCQFEGFMVSLTGIVGL
WSLAILAFERYIVICKPMGDFRFQQRHAVGGCLFTWIWSFIWTVPPLIGWCSYVPEGLRT
SCGPNWYTGGSKNNSYVVALFVTCFLMPLSLIIFSYFSLLVVLRTVAQQQKECQTTQRAE
REVTRMVVAMVMAFLICWLPYTTFALVVAVDKDIVIHPTLASMPSYFSKTATVYNPIIYV
FMNKQFRNCLMTTLCCGRNQFPGDEDTSTSSASRSRTEATNISEGGGGNRISPA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttccacagttgccatcatcactcacaatacgaccatcggtacttttgatggc
ccccagtggccacatgttgctccaaagagtacctacatggccgtggccaccctcatgggt
acggtggtcatcttggcctccttcatgaacgggatggtcatgctcgtgtccatcaaatac
aagaggctgcgctccccgctcaactacatcctggtgaatctggccatcgctgacttgttg
gtcactttcttcggcagcaccatcagtttctccaacaatgtccatggctacttcactctg
ggggagtcgatgtgtcagttcgaaggtttcatggtgtccctgacaggtattgtgggactg
tggtccctggcaatcttggccttcgagcggtacattgttatttgcaaaccgatgggcgat
tttcgattccaacaaaggcacgctgtgggggggtgcctcttcacctggatctggtcattc
atctggactgtgccacctctcattggctggtgcagctacgtacctgagggtttgcgaaca
tcttgtggaccgaactggtacactggaggaagcaaaaacaacagttacgtggtggcgctt
tttgtgacttgtttcctgatgcctttgagtctgatcatcttctcctatttcagccttctg
gtggttctccgaactgttgctcagcaacagaaagagtgtcagacaacacagcgagcggag
agggaggtgacgcgcatggtagttgccatggtgatggcttttctgatatgctggctcccc
tatactacctttgccctggttgtagctgtagataaggacattgtgatccaccccactttg
gcatccatgccctcctatttctcaaagaccgccactgtctacaatcccattatttatgtc
ttcatgaacaaacagttccggaattgcttgatgaccactctatgctgtgggcgtaatcag
ttccctggggatgaagacacatccaccagctctgccagcaggagtcgcactgaggccacc
aacatttccgagggaggaggcggcaacagaatctcaccagcctga
DBGET
integrated database retrieval system
