Scyliorhinus canicula (smaller spotted catshark): 119974416
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Entry
119974416 CDS
T11175
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a isoform X1
KO
K19472
homeobox protein SIX2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119974416 (six2a)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
119974416 (six2a)
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GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_TSHZ3
HTH_72
Motif
Other DBs
NCBI-GeneID:
119974416
NCBI-ProteinID:
XP_038669206
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Position
1:272266465..272282536
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AA seq
298 aa
AA seq
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MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVSFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERYEENNENSNSNVAAGGHNQMNPSMNGNKNMLASSDEEKTPSQTPDHTSGSPAL
LLGSLGQSSNPSLQPLHTLAAPPGPSAVAVSSSDVIHHHALQDSMLNPMSSNLVDLGS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcttccaacttttgggtttactcaagagcaagtggcgtgtgtgtgcgaggtc
ctccagcaagggggtaacatcgagcggctcggccgcttcctctggtcactaccagcctgt
gagcatctgcacaagaacgagagcgtcctcaaagccaaggccgtggtgtccttccaccgg
ggcaacttccgcgagctctacaagatcctggagagccaccagttctccccccacaaccac
cccaagctgcagcagctgtggctcaaggctcactacatcgaggccgagaagctgcggggg
cggccgctgggggccgtgggcaagtaccgcgtccggcgcaagttcccgctgccgcgctcc
atctgggacggcgaggagaccagctactgcttcaaggagaagtcgcgcagcgtgctgcgg
gagtggtacgctcacaacccctacccctctccccgggagaagagggaattggccgaggcc
accggcctcaccaccacacaggtcagcaactggttcaagaacaggaggcagagggaccga
gccgccgaagccaaggaaaggtacgaagaaaacaacgagaactccaattccaacgttgca
gccggcggccacaaccaaatgaatccttcgatgaatgggaacaaaaatatgttggcgagc
tcggacgaggaaaagactccatcccagacgccggatcacacttcgggcagcccggccctg
ctgctgggatccctgggccagagttccaaccccagcctccagcctctgcacacactggcc
gctccgccgggtcctagcgccgtggccgtatctagttcggatgtgatacaccaccatgca
ctacaggactccatgctcaatcccatgtcatccaatttagttgaccttggctcgtaa
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