Scyliorhinus canicula (smaller spotted catshark): 119974493
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Entry
119974493 CDS
T11175
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 2 isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119974493 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119974493 (slc24a1)
Transporters [BR:
scau02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
119974493 (slc24a1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
119974493
NCBI-ProteinID:
XP_038669354
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All DBs
Position
12:2419305..2527435
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AA seq
916 aa
AA seq
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MYLRRKRKLSRNRVLFLISGLLICSVYQIFTGNFQHSTSRRATSGIGSSQESLSIQGRKL
LQAERDIRMQTSTPPTGTPPPGTPPTGVPITRTPAVKTHTTWTPTIWSPTTGVPISRTPT
IGAPRTPTIGAPRTPTIGTPRTPTARTPTMPPNTISSSNKSSSGAITGTPRLRGCIRVGN
EIIPAPTTVPPVLGGSSTEMEALEPPLGHSKGEYPVDLFSVEERRQGWVVLHAMGMIYMF
IALALVCDEFFVPSLGEIIETFDISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIG
TIVGSAVFNILFVIGMCAVFSREMLHLTWWPLFRDVSFYILDLIMLIIFFLDNMIEWWES
VLLLSGYITYVCFMKFNRQIERWFKGNIIANNNVVKVMSMINPVKGKGSLLEKQPIPNSP
PEPTTNQQQPNMKQNIDSESEEKEDNTRMKSKVTLTRGTSTPSLHNSMLRNTIFQLMINT
LDPLTEVKFKLKAEIMNNVAKGKRCSKPQQGNNVKDGDTEQKKTEEKATEEKATEEKATE
EKSTEEEATEEKATEEKGTEEVATEEKATEEKGTEEVATEEKATEEVATEEKATEEKATE
EVVTEEEATEEKGTEEETDLPNSVNIDVTPPTDPPTPSSPREGAEDEDNSANDKKADDEK
DEGDGKGNANDDDGDGDSDGSDDDDSDDDSDEDSDDDEDNKEEDDKESKDEEPLSLEWPD
TRRKQITYLCLLPIVFPLWLTVPDVRNRASKKYFIGTFLGSILWIGAFSYLMVWWAHQVG
ETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWL
LYAASNKFHPVPVSSNGLFCAIVLLFLMLLFVIISIGFSKWKMNKLLGFTMFGLYFAFLI
ISVLLEDRIIVCPVSI
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgagacggaagagaaagttatcccggaaccgggttctcttcctgatttcaggg
ctgctcatttgctccgtttatcaaatcttcaccggaaatttccaacactctacatcgcga
agagcaacaagtgggattggttcgagtcaggaatccctctccatccaaggcaggaagctg
ctgcaagcggaaagggacatcagaatgcagaccagcacccccccaaccgggaccccccca
cctgggacccccccaactggggtgcccataaccaggacccctgcagtcaagacccataca
acctggacccccacaatctggagccccacaaccggagtccccatatccaggacccccaca
atcggggcccccaggacccccacaatcggggcccccaggacccccacaatcgggaccccc
aggacgcccacagccaggacccccacaatgcccccgaacaccatcagcagctccaacaaa
agcagcagtggggcgataacagggacacctcggttaaggggctgcattcgagtgggaaat
gagattatcccggctcccacaacagtgcccccagtgctgggaggcagtagcaccgagatg
gaggccctggaacctccgctgggccactcgaagggtgaataccctgttgacctgttctca
gtggaggagcgcaggcagggctgggtggtgctccatgctatggggatgatctacatgttc
atcgcattggccctggtgtgcgatgaattctttgttccatctttaggggagatcattgag
acttttgacatttcggacgatgtggcgggagccacgttcatggcggctgggggttctgcc
cctgaactcttcacctcgctgattggagtcttcatttcccacagtaacgtgggcattggc
actattgtgggatctgctgtgttcaacatcctgtttgtgatcggaatgtgcgcggtcttc
tccagggaaatgttgcacctgacctggtggcccctgttcagggatgtctccttctacatc
ctggacctgatcatgttgatcatattcttcctggacaatatgatcgagtggtgggagagt
gtcctcttgctctctggctacatcacctacgtctgcttcatgaaatttaacagacaaatt
gagcggtggttcaaggggaacatcatagccaataacaatgtggttaaagtcatgtcgatg
atcaatccagtcaagggcaagggaagcctattggagaagcagccaatcccaaacagtcca
cctgagcccaccaccaaccaacagcaacccaacatgaagcagaacattgattcagagtcc
gaagagaaggaagataacacaaggatgaagtccaaagtgactctaacacgaggaaccagc
accccctcattacacaacagcatgctacggaacaccatcttccagctcatgatcaacaca
ctggacccattgactgaagtgaagtttaagctgaaggctgaaataatgaacaatgttgcc
aagggcaagagatgttcaaaacctcaacaaggaaacaatgtgaaagatggagacactgag
cagaagaagacagaggagaaggcgacagaggagaaggcaacagaggagaaagcaacagag
gagaagtcaacagaggaggaggcgacagaggagaaagcgacagaggagaaggggacagag
gaggtggcgacagaggagaaagcgacagaggagaaggggacagaggaggtggcgacagag
gagaaagcgacagaggaggtggcgacagaggagaaggcgacagaggagaaagcgacagag
gaggtggtgacagaggaggaagcgacagaggagaaggggacagaggaggagacagatctc
cccaattcagtgaatattgacgttacccccccaactgatccacccaccccatcctcaccg
agagaaggtgctgaagatgaagataattctgccaacgataaaaaagcagatgatgaaaag
gatgaaggtgatggaaaaggcaatgcaaacgatgatgatggcgatggcgattcggatggt
agcgatgatgatgatagcgatgatgacagtgatgaagatagtgatgatgatgaggacaac
aaagaagaggatgataaggaatccaaagatgaagaacctttgagtcttgaatggccggac
acccggcggaaacagatcacttacctgtgcttgttgcccatcgtgttcccactctggctc
acagtgcctgatgttcgaaatagagcttcaaagaaatactttattggaacctttcttgga
tctattttatggataggcgctttttcatacttgatggtgtggtgggctcaccaggtgggc
gagacgattggcatttccgaggagataatgggtttaaccatccttgctgcaggtacctcc
atcccggacctcatcaccagtgttattgttgctcgcaaaggtctgggggatatggcggta
tccagctcagtgggaagcaacatcttcgacatcacagtcgggcttccagtgccctggtta
ttgtacgctgcctctaacaaattccatcccgttccagtcagcagtaatggcctgttctgt
gccattgtactactcttcctgatgctgctcttcgtcatcatctccattggcttctccaaa
tggaagatgaacaaattattgggcttcaccatgttcggtctgtactttgcatttttaatc
atcagcgtactgttggaggacaggatcattgtatgcccagtgtccatatga
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