Scyliorhinus canicula (smaller spotted catshark): 119974513
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Entry
119974513 CDS
T11175
Symbol
rasgrf1
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1 isoform X1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119974513 (rasgrf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119974513 (rasgrf1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
PH_11
IQ
MYO6_lever
PH_20
DUF641
Motif
Other DBs
NCBI-GeneID:
119974513
NCBI-ProteinID:
XP_038669379
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All DBs
Position
12:4345400..4518617
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AA seq
1260 aa
AA seq
DB search
MQKGIRLNDGHLSYLGVLAKKDGTRKGYLSKRSSDNTKWHNKWFALLHNMLFYFENDSTT
KSSGLYLLEGSVCERAPSPKPSLSAKEPLEKQYYFTINFGHDAQKALELRTEDVKDCDDW
VAAIGHASYRNLATEHESLMQKYLHLLQIVETEKTVAKRLRHQIEDQEIEVERLKSEIAS
LLKNNERIQLTQPAAQNDEDVDIRKIKKVQSFLRGWLCRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNCFLRPLRMAASSKKPPVAHDDVSSIFLNSETIMFLH
QIFYQGLKARVSSWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILASCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERKSLEYAKSKLEELS
RIMHDEVSETENIRKNLAIERLIVEGCEILLDTSQTFVRQGSLIQVPMTEKGKITRGRLG
SLSLKKEGEKQCFLFSKHLIICTRGSGGKLHLTKMLFDSKRNGVLSLIDCTLMEDPEATE
DESRGLGQDMEHLDFKIVVEPKDSPSFTVILVASSRQEKAAWTSDISQCIDNIRCNGLMM
NAFEENSKVTVPQMIKSDTSLYCDDVDIRFSKTLNSCKVLQIRYASVERLLERLTDLRFL
SIDFLNTFLHSYRVFTTADIVLDKLITIYKKPISAIPARSLELFLASSQNNKLMYREPPK
SPRASRKFSSPPPLSISKSSSPIRRRKLSLNIPIITGGKALDLTTMTSSANGYASMYSSS
SPFSKTTLDINKLYVSSTYSNKLPDEQEGKLDKPEDVGPSKGGAGKTVKEDSETEQAFSD
EAETETSPTKSPPTPKKLKGKNTSEFSLFSYNNGVVVTSSREMDSNRSAVSATSAFAIAT
AGANEGTPTKEKCRRMSLASAGFPADQRICDKEFVIRRAATNRVLNVLRHWVSKHSQDFE
TNTELKTKVIGFLEEVIHDPELLTQERKAAANIIRTLSQEDSVDNQTTLEEIMNMVEEET
FENLSALEIAEELTLLDHLVFGCIPYEEFFGQGWMKPEKNERAPYIMKTTKHFNDISNLI
ASEILKSDDVNIRTTAIEKWVAVADICKCLHNYNAVLVITSALNRSAIFRLKKTWLKVSK
QTKALIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDGLV
NFSKMRMISHIIREIRQFQQTAYKIEQQSKVARYLLVQLNVMDEESLYEASLRIEPKLLT
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaggaatccgcctgaacgatggacacctctcctacctgggggtcctggccaag
aaagatgggacgaggaaaggttacctgagcaagagaagctcggacaacaccaaatggcac
aacaagtggtttgctctgcttcacaatatgttgttttattttgagaatgattccaccacg
aaatcctccggtctgtacttactggaggggagcgtgtgcgagagagcaccgtcacccaaa
ccatcgctatcagccaaggagcccctggaaaagcagtattatttcacaattaactttggc
cacgatgctcagaaagccctggaactaaggacggaggatgtgaaggattgtgatgactgg
gtggcagcaattggccatgcaagttacagaaaccttgcgacagaacacgagtcgctgatg
cagaaatacctgcacttgctgcagattgttgagactgagaaaacagtggcaaagcggctt
cggcaccaaattgaagatcaggagattgaagtggaacgattaaagtctgagattgcttca
ctgcttaaaaacaacgaacgcatccaattaacgcaacctgcggcacagaatgacgaagat
gttgacataaggaaaatcaaaaaggtgcagagcttcctgcgaggatggctatgcaggaga
aaatggaagaccatcattcaggactacatccggtcccctcacgcagagagcatgaggaag
aggaaccaagtggtgttcagcatgctggaggctgaagctgagtatgttcagcagctccac
atcctggttaactgcttcctccgacctctcaggatggctgccagctccaaaaaacccccc
gtggcccacgacgacgtcagcagcatctttctgaacagtgaaacaattatgtttttgcac
caaatattttaccaaggactcaaagcccgcgtatccagctggcccacattagtattagct
gatctgttcgacattctcctcccaatgctgaacatctaccaggagtttgtgaggaatcac
cagtatagcctacagatcctggccagttgcaaacaaaacagagactttgataaactcctt
aaacaatacgaagcaaagccggactgtgaagagagaacgttggagacattcctgacttac
ccaatgtttcagatccccagatacatcctaaccctacatgaactgctggcccacacgcct
catgaacatgtggagaggaagagcttggaatatgcaaagtcgaagctggaggaactctca
cgaataatgcacgatgaagtgagtgaaacagaaaacattcggaagaacctcgccatcgaa
cgactgattgtggaaggatgtgagatccttctggacaccagccagacttttgtgcgacaa
ggctcacttatccaagttccaatgactgaaaaagggaaaatcacacgaggtcggttggga
tcattatccctgaaaaaagagggagagaaacagtgctttctgttctccaaacatttgata
atatgcaccagaggatcaggcgggaaactccatttaacaaaaatgctgtttgacagtaaa
cgtaatggagtactatcactcattgactgcaccttgatggaagacccagaagccacagaa
gatgaatctcggggattgggacaggacatggagcaccttgacttcaaaatcgttgtggaa
ccaaaagattccccgtccttcactgtgatcctggtggcctcatctcgtcaggagaaagcg
gcgtggacaagtgacatcagccagtgcatagataacattcggtgcaatggcctgatgatg
aatgcatttgaagaaaattcaaaagtcacggtcccccagatgattaaatcagacacaagc
ctgtactgtgatgatgttgatatacgattcagtaaaaccctcaattcctgcaaagttctc
cagattcgctatgcaagtgtggaacgcttgttggaacgcctaactgatctgcgcttcttg
agtatagatttcctcaacacgttcttgcattcatatcgcgttttcacaacagctgacatt
gtgctggacaagctcatcaccatctacaagaaaccaataagtgcaatacctgcaagatca
ctcgaactgtttcttgcaagcagtcaaaataataagcttatgtaccgggaacccccgaag
tctcctcgagccagtcggaagttctcctccccaccacctctatcgatttccaagtcatca
tcaccaattcggaggaggaagctttccctaaacattcccattattactgggggaaaggct
ctggatctaaccacgatgaccagctcagcgaatggctatgcaagtatgtactcttcctca
tcgcccttcagcaagaccaccctggacatcaacaaactgtacgtgtcgagcacttactcc
aacaagctccctgatgagcaggaaggcaaactggataaacctgaagatgttggccccagc
aaaggaggtgcaggcaagacggtgaaggaggattctgagaccgagcaggcttttagtgat
gaggccgagacagaaacttcaccgacaaaatctccaccaacaccaaaaaaactgaaaggc
aagaacacgtcagaattctccttgttttcctacaataacggagtggtggtcacatccagc
cgagagatggacagcaatcgcagtgcagtttcagcaacctcagcctttgccattgccaca
gcgggagccaacgagggcaccccaaccaaggagaagtgcaggcggatgtccttggccagc
gcaggttttcctgctgatcaaaggatttgtgacaaagagtttgtcattcgaagagcagcg
acgaatcgtgtgcttaacgtgctgaggcactgggtctcaaagcattcccaggattttgaa
acaaacacggaactgaaaacgaaagtgattggttttctcgaggaagtcattcatgaccct
gagttgctgacccaggagaggaaagcagctgccaacatcatcaggacgttgagccaggaa
gactccgtggacaatcaaacaactttggaagagataatgaacatggtggaggaagaaaca
tttgaaaacctctctgccctggagatagctgaagagttgacattattggatcatcttgtc
tttgggtgcattccatacgaggagtttttcggtcaaggttggatgaaacctgagaagaat
gagagagccccgtacattatgaaaaccaccaagcacttcaatgatatcagcaacttaata
gcttccgagattttgaagagcgatgatgttaacattagaactacagccattgagaaatgg
gtggcggtggccgacatctgtaagtgtctacacaactacaacgccgtgctggtgataacc
tcagccttgaaccgaagcgccattttccggttgaagaagacatggctgaaggtatcaaaa
cagacgaaggcattaatcgacaagttgcaaaaactggtgtcttctgaaggacgattcaaa
aaccttcgcgaggctttgaaaaattgtgaccctccgtgtgttccttatttggggatgtac
ctaacagacctggcatttattgaagagggaacgccaaattatactgaagatggtttagtc
aacttctccaagatgagaatgatatctcacataattcgggaaatcagacaattccagcag
actgcctataagatagagcaacaaagcaaggtggcaagatatttgctggtccagttgaat
gtcatggatgaagaaagtctttatgaagcatccctgaggatagaaccaaagcttctgacc
tga
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