Scyliorhinus canicula (smaller spotted catshark): 119974540
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Entry
119974540 CDS
T11175
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119974540 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119974540 (dmxl2)
Membrane trafficking [BR:
scau04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119974540 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
119974540 (dmxl2)
RAVE complex
119974540 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
119974540
NCBI-ProteinID:
XP_038669448
LinkDB
All DBs
Position
12:22860180..23080597
Genome browser
AA seq
3029 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGGVADIPFTAYASGCDIVILGSDFECVQIIPGAKHGNIQV
GCVECSLQQGRIAASYGNTVCIFEPVPVSHYKRKLVLNYQWQKTGQFFLQSMAYNLAWDP
QGNQLLTATDHLQLWSPPSSDILEEESSHAEEFKLQPDLNDWKCIWQCKTAIPIYLMKWS
PDGEYFATAGKDDSLLKVWYLTTSWKSAVIGTEIFGEKKSSTAVHFSFVYLAHPRAVSGF
SWRKTSKYMPRSSVCNVLLTSCQDGVCRLWAETLLPEDSLLGGQMTESTISTSTSNLPLG
GSQKDKIQHALETIHHLKHLRSRRRSSVLAAHMEVLPSQLGSHEVHRQISHYANALCHFH
IAASINPNTDIPQALAGTAFNTEDGGGNFVVHWLNNKELHFTSSMEIFMEQLRKLTDQQM
EDELDTASQSGLKLKLDTEQDETSEKGSDDENEEVEQDGSTKVSTPTSMGIPLPTMLLDR
KIETLQTEWNRNADMLFTIHPIDGSFLVWHVKYLDEYHPGIFRQVQVAFSSRIPVAFPTG
DANSLSRNIMMYASTFKNVKNFPDNDPNINVMTHCASSSKLNIITPAVMMISKHIDGSLN
QWAVTFAEESAFTTVLIVSHKFRYCGHRFHLNDLACHSVLPLLLTSSHHNALMTPETEFV
EKEKLIVETVKSLKGPTSQQVKNAATRTFHDPNAIYSELILWRMDPIGPLSYSGGVSELA
RINSLHTSAFSNVAWLPTLIPSYCLGTYCNSASACFVASDGQNLRLYQAVVDARKLLDEL
SDPEISKFVGEVFNIVSQQSTARPGCIIELDVITAQCGSNTQLLHVFQEDFILGYKPQKE
EMNKEQECSLGQPAQGYRAPSFSEKFYLVVIERDQRQSVLHMWHLHLKSVQPRLVSTSDN
QISVPEEKIVSLSPNASVLSPLPRSASVANLQTASKLILSSELVYSQKLNVPEGVEVIRA
TPSAGHLSSSSIYPVCLAPYLIVTSCSDGKVRFWRCTVDNNSNSENLEKVHAYQWETWPL
MNEEGEHSNSAVSVTGRPVAVSCSYTGRLAVAYKEPVQPNGITSKEFTMHVSIFECESTG
GSEWVLEQTVHLDGIGKVGGVLDSRVSVDSNLFVYNKSDLYLKGNHMTSNIKHLIHLDWV
SKEDGSHVLTVGVGSKILMYGRLSGIVTEQASSRDGLAVITLPLGGSIKQGTKSKWVLLR
CVDLVSSVDGTPSLPVSLSWVRDGILVIGMDCEMHVYAQWKRSTKPLNDTDGGSLSSFED
LADASPFETKVFSKRHSVADATTGVDDVFGVPGMVQDGGLFEAAHILSPTLPQYHPTQLL
ELMDLGKVRRAKAILSHLVKCIAGEVAVFRDKDPGEGGGPRRHLSRTISVSGSTGKDTII
AGREGTRDYTEIDSIPPLPLYALLSADQDASYKIVEEAPKVIKGSRTRSKKETDDQYADL
FQSPSVTTDDFVDFVIEKKESRSKVINLSQYGPTYFGPEHARVLSSHLMHSSLPGLTRLE
QMFLVALADTVATTSTEVDENRDKNYSGGETLDECGLRYLLAMRLHTCLLTSLPPVYRLQ
LLHQGLSTCHFAWAFHSEAEEELLNMIPAMQKGDPQWSELKAMGVGWWVRNITTLRKTVE
KVAKAAFQRNNSAMDAALFYLAIKKKAVLWGLFRSQYDKKMTEFFKRNFSEDRWRKAALK
NAFALLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMDDIQLAMVIARLYESDYETSSTCKS
ILYEKVLGCKADGSEFLPSQLHPDPFLRSIAYWTLKDYAKALDTLLEQPTKGSEEHPGVL
IKSCNPVVFSFYNYLRAHPLLMRRHFATPEDSLATLGLATEKISEDEINLIERKLFFSTA
NAHFKVGCPVLALEVLSKIPKVLRKAKTSFKSENCRLSAQGQNDAVKHGGNAEATSWSQT
VTGSSGLDWGTSNATGFDWSVPVVTFSEEPLKLEWDDKEDEFEEEDAGGLTMKGTETEHM
AKDEKKDVPEESQTLLKEDSTSSDSRIDVIAEQLKFRACLKILMTELRTLATGYEVDGGK
LRFQLYNWLEKEIYAMHQICNYKTEAIDSAIEIDRKTSSSFDQEELTENTEGASYERHQI
DRRRLQAKQEHAERRKWWLRKNQALLRVFLSYCSLHGAQGGGLASVRMELIFLLQESQQE
TTVKQLQSPLPLPTTLPLLSASIASTKTVIANPVMHLSNHIHDVLYTVVQMGFPPLPGLK
DEKVFILHTLAASLSACIYQSLCDSHSYSQTATNLFTGMVYQGLLLGERRRLRTESFEEH
LTPNSSPSHWPGVSSLINLLGTAQEEDQPKLSVLLCEAVVGVYLSLLIHGLATQDSKELF
RLVAHPLNNRTWAAVFGGGAKTIIKPKKRPELTPVPPEDIDRYRRRFNMKMLVPGRPVKE
TSTPPPVPAERPSYKEKFIPPELSMWDYFVAKPFLPPSESGFMYDSDESIPSDDDDDEDD
AFISDTQLQEHSDPNSYSWALICLGMVKLALNNVRNFFPVAGLEFADLPVTSPLGNAVIK
TLENWQQLLQAKMEQFEGPPPNYINTYPSDFSAAGGPAILRHKAMLEPENTPFKSRHYST
YPVKRLWHFLAKQEILQDTFIRFIFTKKRKQSESVEDHVDQVKQNCIAEHRGGNKVETEM
GYPGRKAKIIHKDSDAIMAFAINKANSNEMVLASTHDVQELDVSAILAAQPYTWIGEDSD
RESRSSDDLEHRSTVSSSQASTTHFGSSQLSTSSSMPWLGSGQTSTGATVLIKRNLNNVK
RMTSHPAHRYYLTGAQDGSVRMFEWNRPQQVICFRQAGNARVTRLHFNSQGNKLGVADGE
GFLSLWQVNQTGSNPKPYLSWQCHSKAAGDFAFVTSSSLITTAGQSNDSRNVCLWDTLIS
PHNSLVHGFVCHDNGATVLQYAPKQQLLISGGRKGFVCIFDIRQRQLLHTFQAHDSAIKA
LALDSSEDYFTTGSSEGNMKVWRLTGHGLIHSFTNEHAKQSIFRNIGAGVVQLEIRPANR
IFSCGADGTLKTRVLPDYFNTPAGIFDIL
NT seq
9090 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccatcaggtgctgaccggagctgtcaaccccggggacaactgctactcggtc
gggggggtcgctgacatccccttcacggcatatgcctctggatgtgacatagtgattctt
ggaagtgactttgaatgtgttcagatcatccctggtgctaagcatggaaatatccaagtg
ggctgtgtggaatgttcccttcagcaaggcaggattgctgcttcttatgggaacactgtt
tgcatttttgaaccagtacctgtaagccattacaaaagaaaacttgtccttaactatcaa
tggcaaaagacaggacagttttttcttcagtctatggcatacaacctggcttgggatccg
caaggtaaccaattattgacagctacggatcacctacaattatggtcacctccctctagt
gacattcttgaggaagaaagtagtcacgctgaggaatttaaattgcagccagatttaaat
gactggaaatgtatctggcagtgcaagactgctattccaatatatctcatgaagtggtcc
cctgatggagaatactttgcaacagcaggaaaagatgactcccttctgaaagtatggtat
cttacaactagctggaagtctgctgtgataggcacagaaatatttggggagaaaaagtca
tctacagctgtccacttttcctttgtgtatctggcacatcctcgtgcagtatcaggattt
tcatggcggaagactagtaaatatatgccaaggagttctgtatgcaatgtactactgacg
tcatgtcaagatggtgtctgtcggctgtgggctgaaaccttattgccagaagatagtctt
cttggaggacaaatgacagaatctaccattagtacctcaaccagcaatcttcctcttggt
ggaagccagaaagacaaaattcagcatgcactggagacaattcaccatttgaaacatcta
agaagtcgtcgcagatcttcagttctggctgctcatatggaagttttgccaagccaactg
ggatcgcatgaagtccacagacaaatttcacactatgctaatgcactctgtcactttcat
attgcagcgagcattaatcctaatacagatattccacaagcactagctggcacagctttt
aacactgaagatggaggtggcaattttgtggttcactggctgaataataaagagctgcat
tttacatcatctatggaaatattcatggagcaattgagaaagctcacagatcagcagatg
gaagatgaacttgacactgcgagtcagagtggattgaaattgaaactcgacaccgaacaa
gatgaaacttcagagaaaggatcagatgatgagaatgaggaggttgaacaagatgggagc
accaaagtatctacgcctacctctatggggattccactgcccactatgttgttagatcga
aaaattgagacgttgcaaacagagtggaacagaaatgccgatatgctatttacaatccat
cctatagatggttcatttttagtatggcatgtaaagtatttagatgagtatcacccagga
atcttcagacaagtccaggttgctttttcatcccggatccctgttgcttttcctactggt
gatgctaactcacttagcagaaatatcatgatgtatgcatctacttttaaaaatgtgaag
aactttccggataatgatccaaatatcaatgtgatgacccattgtgcgagtagctcaaaa
ttaaatatcatcaccccagcagttatgatgatttcaaaacacattgatggatcactaaat
cagtgggcagtaacatttgctgaagaatctgctttcaccacagttctaatcgtgtcacac
aagtttagatattgcggacatcgtttccatctaaatgacttggcttgtcattcagtgtta
ccattgttgttgacatcttcacatcacaatgcactaatgactcctgaaactgaatttgtt
gaaaaggaaaagcttattgtagaaactgtgaagtcgttaaaagggccaacttctcagcag
gttaaaaatgcggctacacgaacatttcatgaccctaatgccatctacagtgaactgata
ctttggcgtatggatccaatcggaccgttgtcatactctggtggagtttcagagctggca
cgtatcaattccttacatacttctgctttttcgaatgtggcctggcttccaacattgatc
ccaagctattgccttgggacctactgcaactctgctagtgcttgttttgtcgcttctgat
ggtcaaaatctcaggctttatcaggctgtggttgatgctaggaaacttctggatgagctt
tctgatcccgaaatttcaaaattcgttggggaagtgttcaacatagtaagccagcaatca
acagctcgaccaggttgcattattgaactggatgtaataaccgctcagtgtggctcaaac
acacaactacttcatgtgtttcaagaagattttattttgggatataaacctcagaaagaa
gaaatgaataaagagcaagaatgttctctcggtcaacctgcccaaggatatcgtgcacca
tcattttctgaaaagttctaccttgtggtgatagaaagagaccagcggcaatctgttctt
cacatgtggcacctccatttgaaatctgtacagcctcgtttggtgagtacatcagataat
cagatatctgtaccagaagaaaagatcgtcagcctatctccaaatgcttctgttttaagt
cctcttccacgatctgcatcagttgctaatcttcagactgctagcaagttgatacttagc
tctgaattagtctacagtcagaaattaaatgtacccgagggagtggaagtaatccgagca
actccttctgcaggtcacttgagttcatcttcaatctacccagtatgcctcgcaccttat
ttaatagtgacatcatgctctgatggtaaagtgagattttggcgatgtactgtggataac
aattcaaactctgaaaatcttgagaaagtacatgcttatcaatgggaaacttggcctttg
atgaatgaggaaggagaacacagtaacagtgccgtgagtgttactgggcgaccagtggcc
gtgagctgttcatacactggacggttggctgtagcctataaagagcctgtacagcccaat
ggcattacatcaaaagagttcacaatgcatgtctccatatttgagtgtgaatctactgga
ggatcagagtgggtgttggaacagacagttcatttagatggtataggaaaggttggaggt
gtcctggactctcgggttagtgtggatagcaatttatttgtgtataataaatcagacctt
tatctcaaaggcaaccacatgacatcgaacataaaacatttaatacatttggactgggta
tcaaaagaagatggctctcacgttcttacagtgggagtcggttccaaaattctcatgtat
ggaagactgtccgggattgtaactgaacaagctagtagcagagatgggctggcagttatt
actttgccactagggggaagcattaaacaaggaacaaaatcaaaatgggtattgttgaga
tgtgtggatttggtgtcttcagtggatggaaccccttcacttccagtttccctctcctgg
gtaagagatggcatcctggtaattgggatggactgtgaaatgcatgtgtatgcacagtgg
aaacgttctacaaaaccattaaatgacactgatggtggcagcttgtcatcttttgaagat
ttagctgatgcttccccatttgagactaaagttttttcaaagcgacacagtgttgctgat
gcaacaactggtgtcgacgatgtatttggagtccccggaatggttcaagatggtggattg
tttgaagctgctcacattctttctccgactcttccccaatatcaccccactcagcttttg
gagctcatggatttgggcaaggtgcgcagagctaaagcaattctttcacatttagttaaa
tgtattgctggcgaagttgcagtttttcgggataaagacccaggagagggaggagggcct
agacgtcacctttctcgaaccatcagcgtaagtggaagtacaggaaaggatacaattata
gcaggaagagaaggcacacgcgattatactgagatagactcaattccaccactgccactt
tacgcattgctatctgcagatcaggatgcatcctacaaaattgttgaagaagccccgaag
gtaatcaaaggttcacgaacccgaagtaaaaaggagacggatgatcagtatgctgatttg
tttcagtctccaagtgtaaccacagatgattttgttgactttgtaatcgaaaagaaggaa
tctagatcaaaagtcataaatttgtcacaatatggaccaacatactttgggccagaacat
gcccgtgtcctttccagtcacctgatgcactcgagtttgccagggcttacacgactagaa
caaatgttccttgtagctttggctgacacagtagctaccacaagcacagaagttgatgaa
aatagagacaagaactattctggcggtgagacactagatgaatgtggtttacgttatttg
cttgccatgcgcttgcatacatgtctcctgacatctctgcctccagtctatagacttcaa
ctcttacatcaaggcctgtctacatgccactttgcctgggccttccattctgaagctgag
gaggagttgctcaatatgattcctgccatgcagaaaggagatcctcagtggtctgagttg
aaagccatgggagtaggatggtgggttcgaaacattactacactccgcaagactgttgag
aaggttgcaaaagctgctttccaaagaaataactctgcaatggatgcggctttattttat
cttgctataaagaaaaaggctgttctctggggtttgttcagatcacagtacgataaaaag
atgacagagtttttcaaacgcaattttagtgaagacagatggcgtaaagcggctttgaaa
aatgcatttgctttgctgggtaaacaacgttttgaacaatctgccgcattttttcttttg
gctggttctttaaaggatgctattgaggtgtgcctggaaaaaatggatgatattcaattg
gccatggttattgcaagattgtatgaatccgactatgaaacatcctctacttgtaaatct
atcctttatgaaaaagttcttgggtgtaaggcagatgggtctgaatttttgccaagccaa
ctacatccggatccatttctgcgaagtattgcatattggactctgaaggattacgctaag
gcattggatacactactggaacagcctacaaagggtagtgaagagcatccaggagtcctc
ataaaatcttgcaatccagtagtgttcagcttttacaattatcttcgagcccaccccttg
ctgatgcgaagacattttgctacccctgaagattctttggctactttaggacttgcaaca
gagaaaatcagtgaagatgaaatcaaccttattgagaggaagttatttttctccacagca
aatgctcattttaaagttggttgccctgtcttggctcttgaggtgctgtcaaaaatacca
aaggtcttaagaaaagcaaaaacatccttcaaaagtgaaaactgcaggttgagtgctcag
ggccaaaatgatgctgtgaaacatggaggaaatgctgaagctactagctggtcacagact
gtaacaggttcttctggtctggactggggaaccagcaatgctactggctttgattggagt
gtaccagtagtgacattttctgaagaaccgctaaaactcgagtgggatgataaagaagac
gaatttgaagaggaggatgctggtggattgaccatgaaaggtacagaaacagagcatatg
gctaaagatgagaaaaaggatgttcctgaagagtcacaaactcttctgaaagaagattcc
acttcctctgactctcggattgatgtgatagcagaacagttaaaattcagagcatgtttg
aaaattctaatgactgaacttaggacattggctacaggatatgaagtagatggaggaaaa
ctcagatttcaactgtacaactggttagaaaaagagatctatgctatgcatcaaatctgc
aattataaaactgaagctatagattctgctattgaaatagatagaaagaccagtagttca
tttgaccaggaagagttaactgagaacacagaaggtgcatcatatgagaggcatcagatt
gatcgacggaggctccaagcaaagcaagaacatgcagaaagacgaaaatggtggttgcgg
aaaaatcaagctctgctcagagtgtttctaagctactgcagtttgcatggagctcagggt
ggtggcttagcctcggtcaggatggaacttatctttctattacaagaatcacagcaggaa
actactgtgaaacagcttcagtctccacttcctttacctaccactttgcccctcctttct
gcaagcattgcttcaaccaaaactgtgatagccaaccctgtcatgcatttgagtaaccac
atccatgatgtcttgtatacggtggtccagatgggttttccacctcttccaggtcttaag
gatgaaaaggttttcattctgcacactttggctgcttcactctcagcctgtatttatcaa
tctttatgtgacagccacagctacagtcaaacagctacaaacctgtttacaggaatggtt
tatcagggacttctgttaggtgaaagacgtagactgcggactgaaagctttgaagagcat
ctgactccaaattcttccccttcacattggcctggtgtttcatcgctgattaatcttctt
ggaacagctcaggaagaagatcaacccaaattgagcgtgttgctttgtgaggcagtggtt
ggtgtctatctaagtcttttgatccatggtcttgccactcaagatagcaaagagctcttt
cgattagttgctcatccactaaataatcgaacctgggctgcagtatttggaggcggtgca
aaaacaataataaaacctaaaaaacggccagaacttacaccagttcctccagaagacatt
gatcgatatcggcggagatttaacatgaagatgttggttccgggtagaccagtaaaggag
acttcaacgccaccacctgtacctgcagagagaccatcatacaaagaaaaatttattcca
cctgagctcagtatgtgggattattttgtagccaagccattcctacctccatctgagagt
ggatttatgtacgactcagatgaaagtatccccagtgatgatgatgacgatgaagatgat
gcttttatttctgacactcaactacaagagcattcagatcccaactcttacagttgggca
ctgatatgcttaggaatggtcaagcttgcactgaacaatgtgaggaacttctttcctgtt
gcagggttggagtttgcagatctcccagtaacttcaccattgggtaatgctgttattaag
actttagaaaactggcaacagctacttcaggcaaaaatggaacagtttgaaggcccacca
ccaaattatattaacacctacccgagtgacttctctgcagctggtggtccagccattctg
cggcacaaagcaatgcttgaaccagaaaacactccgttcaagtcaagacattattccacc
tatcctgttaaacggctatggcacttcttggctaagcaagaaattctgcaagacacattc
ataagatttatattcacaaagaaaaggaaacaaagtgagtcagtagaagaccatgtggac
caagtcaaacaaaactgcatagcggagcatcgtggaggcaacaaggttgaaacagaaatg
ggctacccaggtagaaaagcaaagattatacacaaagattctgatgccataatggcattt
gcaattaataaggcaaattccaatgagatggttttggcttcaacgcatgacgtgcaagaa
cttgatgtatctgcaattctagctgctcagccttatacctggattggtgaagattcagac
agagaatctagaagttcagacgaccttgaacatcgctcaacagtgagcagtagtcaagct
agtacaactcattttggatccagccagctttctacttcctcttcgatgccttggctagga
agtgggcaaaccagcacaggagccactgtgctcataaaaaggaacttgaacaatgtgaaa
cggatgacttcccatccagcccaccgatattatcttacaggtgcgcaagatgggagtgtt
cgaatgtttgaatggaatcggccacaacaggttatatgtttccgacaagctggcaatgca
agggttacccgactacatttcaattcccaaggcaataagttgggggtggcagatggagaa
ggctttctgagtctttggcaagtcaaccaaactggatctaatcctaaaccttatcttagc
tggcagtgtcacagtaaagctgctggtgactttgcgtttgtcacctcctcaagtctcata
actacagcaggacaatctaatgacagcagaaatgtttgtttatgggatacactaatttca
ccacacaatagtcttgtgcatggttttgtctgccatgacaatggtgccacggtgcttcag
tatgcaccaaagcaacaacttctgatttctggaggcaggaaaggctttgtctgcattttt
gacatacggcagaggcagttgctgcacacgtttcaggcacatgattctgctattaaggcc
cttgctttggactcctcagaagattatttcactacaggttcatcagaagggaatatgaag
gtgtggaggttaacaggtcatggattaattcattcatttaccaatgaacatgccaaacag
tccatctttcgaaacattggtgcaggagttgtacagctggaaatcagaccagccaatcgc
atcttttcctgtggagcagatggaactttgaagacacgagttctgccagactattttaat
acccctgctggaatatttgacatcttgtag
DBGET
integrated database retrieval system
