Scyliorhinus canicula (smaller spotted catshark): 119974649
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Entry
119974649 CDS
T11175
Name
(RefSeq) RNA-binding protein FUS-like
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119974649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scau03021
]
119974649
03019 Messenger RNA biogenesis [BR:
scau03019
]
119974649
Transcription machinery [BR:
scau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119974649
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119974649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119974649
NCBI-ProteinID:
XP_038669648
LinkDB
All DBs
Position
12:complement(108887898..108921443)
Genome browser
AA seq
420 aa
AA seq
DB search
MSDYGNYSQPGAQAQSYGAYGAQSSQSFGHSAEDHGGYEQSGDASGYGQDRRGYGTSYGQ
AQSGLNSQSSTPGYQQSGHSYGSENSQNMYGQQQYGSYGQHSDSPSSYGSKSETQYSTQP
SQPSYSHPTSYHPPHDNYGQQSSGDDYEQDRPGRSKFGDDNRNFGRSQGNGGRGRGGYGH
GGFDSDGRGGRGRMGGGDRGGFNNFGGSRDREQGPNPASDDNSDNNTIFVQGLGDNVTTE
QVADFFKQIGVIKINKKTGNAMINLYTDKVTGKLKGEATVSFDDPPSAKAAIDWFDGKDF
HGNIIKISFATRRSEFVRGGGRGGQMGRGHGGRGFQGGGGSRGDDWTCPNPTCGNVNFAW
RNECNQCKTPRADSGEHHGRGGFRGRGGFRGGRGGDRGFGSGKMGGGRNDHRSERRDRPY
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattatggaaattacagccagcctggagctcaagcacaaagctatggagcctat
ggtgcacagtcaagccaaagttttgggcattctgcagaggatcatggtggatacgagcag
tctggtgatgcttcaggatatggacaagaccgacgtggatatggtacaagttatggacaa
gcacagtcagggttgaattcccaatcctcaacaccaggctaccagcagagtggacatagc
tatggaagtgagaattctcaaaatatgtatgggcagcaacagtatggaagttatggacaa
cattcagattcccctagcagctatggctcaaagtctgagacacaatatagtacccagcca
agccaaccaagttacagccacccaacttcgtatcatccacctcatgacaactatggccaa
cagagctcaggagatgactacgagcaggataggcctggcagaagtaaatttggcgatgac
aaccgcaactttggcagatcgcagggtaatgggggtagaggccgtggaggatatggtcat
ggtggctttgacagtgatggtagagggggacgtggtcgaatgggaggtggtgaccgtggt
ggcttcaataattttggtggttcaagagatcgtgaacaaggacctaaccctgcttctgac
gacaactctgataacaacaccatttttgttcagggtcttggagataatgtgacaactgaa
caagttgctgatttctttaaacagattggtgtgattaagattaataagaaaactggaaat
gccatgatcaacctctatactgacaaagttacaggcaaactgaagggtgaagcaacggtg
tcttttgatgacccaccatcagcaaaagcagcaattgattggtttgatggaaaggatttc
catggaaacataataaaaatctcatttgcaacaaggcgatccgagtttgtgagaggtggt
ggtcgtggaggtcagatgggcagaggacatggtggtcgtggttttcaaggtggaggtggt
tcaagaggtgatgattggacttgcccaaacccgacatgtggtaatgttaactttgcttgg
agaaatgaatgcaaccagtgcaaaactcccagagcagacagtggtgaacatcatggaaga
ggtggtttcagaggccgaggaggattccgtggaggcagaggtggagatcgtggttttggc
tctggaaaaatgggtggaggaagaaatgatcacagatcagagcgacgtgacaggccttac
tga
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