Scyliorhinus canicula (smaller spotted catshark): 119974673
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Entry
119974673 CDS
T11175
Name
(RefSeq) general transcription factor II-I-like isoform X1
KO
K03121
transcription initiation factor TFII-I
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119974673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scau03021
]
119974673
03036 Chromosome and associated proteins [BR:
scau03036
]
119974673
Transcription machinery [BR:
scau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119974673
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
119974673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTF2I
SAVED
Motif
Other DBs
NCBI-GeneID:
119974673
NCBI-ProteinID:
XP_038669686
LinkDB
All DBs
Position
12:complement(112115839..112311206)
Genome browser
AA seq
1118 aa
AA seq
DB search
MKGNMAQVGNSQIIQEEPSSAENLLAVKFLMSALESMCQEIAKSKAEVACIAVYEKDIFV
VGTERGRSFIGSRKDFQTDFVKFCVAEERKAAEKFRSEDVLCVTPTTVHKQVDVETTRKS
VEELFSSLYGKALGKPTPNPVPYEKILKDPAAVGIQGLPDGVCFKRPSDYDNATLKKILE
QKAKIIFLIKRPFLDASIQQVEAIQPTGKENAQVPVASFVPVQVKTEPSDDNQPSTSVAI
KAEPEDPDYYRYSVQGPSATTSEASDTEAANQSKAYQAESVPQNEADLSSDETEEEFTAD
DSTQQEYSETSEDPEVEVTIEGNDEYFPPNKRPKNTVQPTDAGATVKRKSREFNFEQWNA
RITELRKQVEDLFERKYAQATFTTGPVVIPYPLFQSNSEDLCVDGLPEGIPFRRPSTYGI
PRLERILLAKDRIKFVIKKPELLANEQEETTPDKTVPGAKEEWNTRITKLRRMVEELFSR
KYAEAMGQTQAMIVPYRKFESHPKELYVEGLPDNIPFRSPSWYGIPRLEKILQSSDRVKF
VIKRSELLVNEQSETHVRLNVTGSDPNTDHFRDRLMPSFADASGKEDWNIRITKLRKQVE
EIFNTKFAEALNLPEPVKVPYPLFESNPQHLYVEGLPDGIPFRSPTWFGIPRLERIIRGS
AKVKFFVKKPELVEPHLPDRLKKGKRTDGTPPTNRGRRRVSRPPETNLTRTVKDSSSAPE
KVPQVPTTPSSPEIEVTIEASDETPPPVKTVANVTQANDSNATFKQRGREFSFEQWNAKI
TELKQQVETLFNEKCSEALGTSEPVRVPYALFESHPDDFYIEGLPDGVPFRRPSTFGIPR
LEKILRAKAKIKFIIKKPDLFQTALQEASKRPQTRSQTSLEEKAPEVKKPTTTTTTAPTV
ATATTATATAATAIAETATATVVENRAVALPTATGVEDLNIIQVTVPEGENEKMSKVEKA
RQLREQVNDLFSKKFGEAIGMNFPVKVPYRKITTNPGCVIVDGMPPGVPFKAPSYLEISA
MKKILESANFIKFTVIRPFPGLLINNQLAEQSGTEPPDAAVAQSTTPPPPPSMVQIVPAE
QTPVLPAVSLVPLLSTPQGPDVSLHEKSQPPESSEGEA
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaaacatggcacaagttggaaattcacaaattatacaggaggaaccctccagc
gctgaaaacctactggcagtgaaattccttatgtcagcactggagtcgatgtgccaggaa
attgcaaagtcaaaagctgaagtggcttgtattgctgtgtatgaaaaagatatatttgtc
gtagggaccgagcgaggaagatcattcattggaagccgaaaggattttcagactgacttt
gtcaaattctgtgtggctgaggagcgaaaggcagcagaaaagttcagaagtgaagatgtt
ctctgtgtgacaccgactactgtgcataagcaggttgacgttgaaacaacaagaaaatca
gttgaagagttgttttcttcactctatggtaaagcccttgggaaacctactccaaaccct
gtgccatatgagaagatcttgaaggacccagctgctgtaggaatacaaggacttccggat
ggagtctgttttaagcggccttcagattatgacaatgcaacgttaaaaaagattttggag
caaaaggcaaagattatatttttaataaagaggccattcttggatgcatccattcagcaa
gtggaagcaatacagcctactggaaaggagaatgcacaggtgccagttgccagctttgtt
ccagttcaggtgaaaactgagccatctgatgacaaccaaccgagcacatctgttgcaatc
aaagctgagccagaagatccagattattatcgatacagtgttcaagggcctagtgcgact
acttcagaagccagtgatactgaggcagctaaccaatcgaaggcttaccaagcagagagt
gtgccgcagaatgaagccgatctgtcaagtgatgagactgaggaggaatttacagcagat
gattcgactcagcaagaatattctgaaactagtgaggacccggaagtagaagttaccatt
gaaggtaatgatgaatatttcccaccaaataagcgaccaaagaatactgtacagccaaca
gatgctggggccacggtgaaacggaaaagtagggagttcaattttgagcaatggaacgcc
agaattacggagttgagaaagcaagttgaagatctttttgaaaggaaatatgctcaagct
acttttactaccggaccagttgtgatcccgtatccactcttccagtccaactctgaagat
ctttgtgttgatggtttacctgaaggcattccatttaggcggccatccacctatggcatt
ccaagattggagaggatccttctagcaaaagaccggataaaatttgttataaaaaaacca
gaactgttagcaaatgagcaggaagaaacaactccagacaaaactgtcccaggagcaaaa
gaagagtggaataccagaatcactaaactaaggaggatggttgaagaacttttcagcagg
aaatacgctgaagccatgggacagacacaagcaatgattgtgccctatcgtaaatttgaa
tctcatcctaaagaactatatgtggagggtttacctgacaacattccattccgaagccct
tcttggtatggtatcccgaggcttgagaagatcctacaatcaagtgatcgagttaagttt
gttattaaaagatcagaactactggttaatgagcaaagcgaaacccatgtacgattaaac
gtaacaggttctgaccctaacactgatcattttagggacagactgatgccatcttttgct
gatgcctcagggaaagaagattggaatatcagaattactaaactaagaaaacaggttgag
gagatatttaacacaaaatttgctgaagctctgaaccttccagaaccagtgaaggttcca
tatccattatttgagtccaacccacagcatctctatgtggaagggttgccagatggaatt
ccttttagaagcccaacgtggtttggaatacccagactggaaaggatcattcgagggagt
gcaaaagttaaattctttgtgaaaaagccagaactcgtggagcctcacctccctgataga
ttgaaaaaaggaaaacgtactgatggaaccccacccaccaacagagggaggagacgtgta
tcccgcccacctgagacaaatttaacacgaactgttaaagactccagttctgcaccagaa
aaagttccacaagtaccaacaactccaagcagcccagagatagaagttaccattgaagct
tctgatgaaacgccgccaccagtcaagacagttgcaaatgtcacacaagccaatgattca
aatgctacattcaaacaaagaggcagggaattctcttttgaacagtggaatgccaaaatt
actgagttgaaacagcaagtggagacacttttcaatgaaaaatgtagtgaagcattaggc
acttcagagccagtgagagtaccatatgcattgttcgaatcacatccggatgatttctac
attgaaggcttgcctgatggtgtgcctttcaggagaccatcaacctttggaattcctagg
ttggaaaagattctcagagcaaaagccaagatcaaatttataattaaaaaaccagatttg
tttcagactgcattacaggaagcttccaaacgtccccagacaaggtcgcaaacttccttg
gaagagaaagccccagaggtgaaaaagccaacaacaactactacaactgctcctactgta
gcaactgctactacagcaactgctactgccgcaactgctatagctgaaacagctactgcc
acagttgtagaaaatcgagctgttgcattaccaactgccacaggtgttgaagatcttaat
atcattcaagttacagtcccagaaggtgaaaatgaaaaaatgtcgaaggtagaaaaagcc
agacaactgagagaacaagtaaatgacctgttcagcaagaaatttggggaagcaattgga
atgaatttcccagtgaaggttccttacagaaagataacaaccaaccccggatgtgttatc
gttgatggtatgcctccaggagttccgttcaaagcacccagttaccttgaaataagtgcc
atgaaaaaaatcctggaatctgcaaactttatcaaatttacagtcataagaccttttcca
gggctcctgattaataaccagctagctgaacaaagtggaacagaaccaccggatgcagca
gtagcacagtcaacaacaccaccgccacctccatcgatggtacaaattgtcccagcggaa
caaacaccagtgctgccagctgtatcactggtgccgcttttatcaacaccacaaggacct
gatgtcagtctgcatgagaaatcccagcctccagaatcatctgagggagaggcgtga
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integrated database retrieval system
